Microbacterium neungamense: JSY13_10300
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Entry
JSY13_10300 CDS
T09212
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mnf
Microbacterium neungamense
Pathway
mnf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mnf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JSY13_10300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnf03021
]
JSY13_10300
03400 DNA repair and recombination proteins [BR:
mnf03400
]
JSY13_10300
Enzymes [BR:
mnf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JSY13_10300
Transcription machinery [BR:
mnf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JSY13_10300
DNA repair and recombination proteins [BR:
mnf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JSY13_10300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UWF77168
LinkDB
All DBs
Position
complement(2122377..2123366)
Genome browser
AA seq
329 aa
AA seq
DB search
MLIAQRPTLTEEKISENRSRFVIEPLEPGFGYTIGNALRRSLLSSIPGAAVTTIRIDGVL
HEFSTIPGVKEDVTEIILNIKQLVVSSERDEPITAYLRKTGAGEVTAADISAPAGVEVHN
PELVIATLNDTARFELELTIERGRGYVSAAQNRNEYAEAGQIPIDSIYSPVLKVSYRVDA
TRAGERTDFDKLVLDVETKNSISPRDAVASAAKTLTELFGLARELNVEAEGIEIGPAPVE
AVLSSELSMPIEDLDLSVRSYNCLKREGINTVAELVALSETQLMNIRNFGQKSVDEVRDK
LVSLGLSLKDSVPGFDGAHFYGGSEDESF
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgtcccactctcaccgaggaaaagatctccgagaaccgcagccgg
ttcgtgatcgagccgctcgagcccggcttcggctacacgatcggcaacgcgctgcgtcgc
agcctgctgtcgtcgatccccggcgccgcggtcaccaccatccgcatcgacggcgtgctg
cacgagttcagcacgatccccggtgtcaaggaggacgtgaccgagatcatcctcaacatc
aagcagctggtcgtctccagcgagcgcgacgagcccatcaccgcctacctgcgcaagacg
ggtgcgggcgaggtgaccgcggcggacatctccgccccggccggcgtcgaggtgcacaac
cccgagctcgtcatcgccaccctgaacgacaccgcccgcttcgagctcgagctcaccatc
gagcgcggccgtggctacgtgtcggcggcgcagaaccgcaacgagtacgccgaggccggt
cagatcccgatcgactcgatctactcgccggtgctcaaggtcagctaccgcgtcgacgcc
acccgtgccggtgagcgcaccgacttcgacaagctggtgctcgacgtcgagacgaagaac
tcgatcagcccgcgcgacgccgtggcatccgccgcgaagacgctcaccgagctgttcggc
ctcgcccgcgagctgaacgtcgaggccgagggcatcgagatcggcccggcgccggtcgag
gccgtgctctccagcgagctgtcgatgccgatcgaggacctcgacctgtcggtgcgctcg
tacaactgcctcaagcgcgagggcatcaacaccgtcgcggagctggtcgccctctccgag
acgcagctgatgaacatccgcaatttcggacagaagtcggtcgacgaggtgcgcgacaag
ctcgtctccctcggcctgtcgctgaaggactcggtgcccggtttcgacggcgcccacttc
tacggcggcagcgaagacgagtccttctga
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