KEGG   Monoraphidium neglectum: MNEG_0072
Entry
MNEG_0072         CDS       T05028                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3D
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mng  Monoraphidium neglectum
Pathway
mng03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:mng00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    MNEG_0072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mng03021]
    MNEG_0072
   03036 Chromosome and associated proteins [BR:mng03036]
    MNEG_0072
Transcription machinery [BR:mng03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     MNEG_0072
Chromosome and associated proteins [BR:mng03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    MNEG_0072
   PBAF complex
    MNEG_0072
   GBAF(ncBAF) complex
    MNEG_0072
SSDB
Motif
Pfam: SWIRM Myb_DNA-binding SWIRM-assoc_2 Myb_DNA-bind_6 Spt20_SEP
Other DBs
NCBI-GeneID: 25726190
NCBI-ProteinID: XP_013906905
UniProt: A0A0D2NUX5
LinkDB
Position
Unknown
AA seq 753 aa
MAAPVAKKSGKINLKDYQSDAFCKQLQPLVSKLNEDITDIKHDVKSLGLTLGQMLQFQED
ALGANSLPPRDFPKLPIQLLEDVRPQANAGLYIVAMRLAGIKRSSALKVFEWLNPGSRRF
NLENLELIRAELMRAGLLKMPVVAAHPSCGVDGQKALEAARKLQATVVEDLADPSVTHLL
YPSGALCIAEDDPGSQMRTLQTSGQRARVHWRFLPDSYAEWLPLRSAPNASASERTQPPG
SGPWRVSLRWALDSEKFNEWMNPQDYEADEQKAKQVAAAEAAAALGNKRAAQLAVAQAAA
LAGAKRIRTDAEVDASDPGVEVAPGAVKRRVINPHKPVLDGTASAENISQGQLDPTAPTP
MLERLPPDRRQQQQQQQQQQQQQQEQQQGQGDAASAEAAEGTAEKVLSRRLLMPMHAAWF
SFVQVHNNEKKVLPEFCSNSTSGLTLKAYLTMRNGLVELYRQQPQRRLTMEEASRAMAQY
DPAIVGRVYRFLESWGLINWLAPRAIPTPAATALPAGTDLAPSAAPGAERPRLPWGAVLG
GGAGGSGLLRLRFPTVAEGVAAACGGGTLNMTQREARSSKLESATTLATGRRRYFCSAMP
WVDCTPLRYHCTKVPGIDLCPQAYAEGRFPPGCSVADFARLEGGADRNAPDATAGATAWT
PQETLLLLEGLDMHGDQWPAVAEHVGTHGVLECITHFLQLPIEDDFLDELERRATAAPGQ
DGDGAGVPQEVEQQQQLLRQREEEEGIRLLDTL
NT seq 2262 nt   +upstreamnt  +downstreamnt
atggcggccccagttgcaaaaaagagcggaaagattaacctcaaggactaccagtcagac
gcgttctgcaagcagctccagcccctggtttcgaagctgaacgaggacataaccgacatc
aagcacgatgtcaagagccttgggcttaccctggggcaaatgttgcagttccaggaggac
gccctcggcgcgaattccctcccgccccgtgacttccctaagctgcccatccagctgctg
gaggacgtgcggccccaggccaacgccggcctttacattgtggcgatgcgcctcgcgggc
atcaagcgctcctcggccctcaaggtctttgagtggctgaaccctggcagccgccgcttc
aacctggaaaacctcgaactcatccgagcggagctcatgcgggcggggctgctgaagatg
cctgtggtggcggcacatccaagctgtggagtggatgggcagaaagctttggaagctgcc
aggaagctgcaggccacagtggtggaggacctggccgacccgtctgtgacccacctcttg
taccccagcggagccttgtgtatagcagaggacgaccctggcagccagatgcgcacgctg
cagacaagcggccagcgtgcgcgcgtgcactggcggttcctgcccgacagctacgccgag
tggctgccgctgcggtctgcgcccaacgccagcgcgtccgagcgcacccagccgccgggg
agtggtccgtggcgggtgtcgttgcggtgggccctggactctgagaagttcaacgagtgg
atgaacccccaggactatgaagcagatgagcagaaagctaagcaggttgcagcagcagag
gcggcggcggccctgggcaacaagcgcgccgcgcagctggcggtggcgcaggcggcggcc
ctggcgggcgccaagcgcatccgcaccgacgccgaggtggacgcgtcagacccaggggtc
gaggtggcgcctggtgcggtgaagcggcgtgtgatcaatcctcacaagcctgtgctggac
ggcacggccagcgctgagaacatatcacagggacagctggaccccactgcgcccacccct
atgttggagcgcctccccccagaccggcggcagcagcagcagcagcagcagcagcagcag
cagcagcagcaagagcagcagcagggtcaaggtgatgcagcatcggcggaagcggccgag
gggaccgcggagaaggttctcagcaggcgccttctgatgcccatgcacgcggcgtggttt
tcttttgtacaagtgcacaacaacgagaagaaggtgctgccagagttctgcagcaacagc
acgtcggggctcacgctcaaggcctacctgacgatgcgcaacggcctcgtggagctgtac
cgccagcagccgcaacggcggctgacgatggaggaggcctctcgggcgatggcccagtat
gaccccgcgattgttggcagggtataccgcttcctggagtcttggggcctcatcaactgg
ctcgcccccagggccatccccacgcccgcagccactgcccttcctgccggcactgacctc
gcgccatcagccgcgcctggcgcagagcgcccgcggctgccgtggggtgctgtgctcggc
gggggcgccggcgggagcgggctgctgcggctgaggttcccaaccgtcgcagaaggcgtg
gcggcggcatgtggcggcgggacgctcaacatgacacagcgcgaggcacgctcctccaag
cttgagtcggccaccacgctggccaccggccgccgccgctacttctgcagcgccatgccc
tgggttgactgcacccccctgcgctaccactgcaccaaggtgccgggcatcgacctctgc
ccccaagcgtatgctgagggacgatttccgcctggctgcagcgtggccgactttgcgcgg
ctggaaggcggggcggatcggaacgcgccggatgcaacagcaggcgccactgcctggacg
cctcaggagaccctgctgctgctcgagggcttggacatgcatggcgaccaatggccggct
gttgctgagcacgtgggcacgcacggcgttttggagtgcatcacgcacttcctgcagctg
cccatcgaggacgactttctggacgagctggagcgccgggcgacggccgcgcccgggcag
gatggcgacggtgcaggggtgccgcaggaagtggagcagcagcaacagctgctgcggcag
cgtgaggaggaggagggcatcaggttgttggacactctgtga

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