Monoraphidium neglectum: MNEG_0072
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Entry
MNEG_0072 CDS
T05028
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mng
Monoraphidium neglectum
Pathway
mng03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
MNEG_0072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mng03021
]
MNEG_0072
03036 Chromosome and associated proteins [BR:
mng03036
]
MNEG_0072
Transcription machinery [BR:
mng03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
MNEG_0072
Chromosome and associated proteins [BR:
mng03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
MNEG_0072
PBAF complex
MNEG_0072
GBAF(ncBAF) complex
MNEG_0072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_2
Myb_DNA-bind_6
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
25726190
NCBI-ProteinID:
XP_013906905
UniProt:
A0A0D2NUX5
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MAAPVAKKSGKINLKDYQSDAFCKQLQPLVSKLNEDITDIKHDVKSLGLTLGQMLQFQED
ALGANSLPPRDFPKLPIQLLEDVRPQANAGLYIVAMRLAGIKRSSALKVFEWLNPGSRRF
NLENLELIRAELMRAGLLKMPVVAAHPSCGVDGQKALEAARKLQATVVEDLADPSVTHLL
YPSGALCIAEDDPGSQMRTLQTSGQRARVHWRFLPDSYAEWLPLRSAPNASASERTQPPG
SGPWRVSLRWALDSEKFNEWMNPQDYEADEQKAKQVAAAEAAAALGNKRAAQLAVAQAAA
LAGAKRIRTDAEVDASDPGVEVAPGAVKRRVINPHKPVLDGTASAENISQGQLDPTAPTP
MLERLPPDRRQQQQQQQQQQQQQQEQQQGQGDAASAEAAEGTAEKVLSRRLLMPMHAAWF
SFVQVHNNEKKVLPEFCSNSTSGLTLKAYLTMRNGLVELYRQQPQRRLTMEEASRAMAQY
DPAIVGRVYRFLESWGLINWLAPRAIPTPAATALPAGTDLAPSAAPGAERPRLPWGAVLG
GGAGGSGLLRLRFPTVAEGVAAACGGGTLNMTQREARSSKLESATTLATGRRRYFCSAMP
WVDCTPLRYHCTKVPGIDLCPQAYAEGRFPPGCSVADFARLEGGADRNAPDATAGATAWT
PQETLLLLEGLDMHGDQWPAVAEHVGTHGVLECITHFLQLPIEDDFLDELERRATAAPGQ
DGDGAGVPQEVEQQQQLLRQREEEEGIRLLDTL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccagttgcaaaaaagagcggaaagattaacctcaaggactaccagtcagac
gcgttctgcaagcagctccagcccctggtttcgaagctgaacgaggacataaccgacatc
aagcacgatgtcaagagccttgggcttaccctggggcaaatgttgcagttccaggaggac
gccctcggcgcgaattccctcccgccccgtgacttccctaagctgcccatccagctgctg
gaggacgtgcggccccaggccaacgccggcctttacattgtggcgatgcgcctcgcgggc
atcaagcgctcctcggccctcaaggtctttgagtggctgaaccctggcagccgccgcttc
aacctggaaaacctcgaactcatccgagcggagctcatgcgggcggggctgctgaagatg
cctgtggtggcggcacatccaagctgtggagtggatgggcagaaagctttggaagctgcc
aggaagctgcaggccacagtggtggaggacctggccgacccgtctgtgacccacctcttg
taccccagcggagccttgtgtatagcagaggacgaccctggcagccagatgcgcacgctg
cagacaagcggccagcgtgcgcgcgtgcactggcggttcctgcccgacagctacgccgag
tggctgccgctgcggtctgcgcccaacgccagcgcgtccgagcgcacccagccgccgggg
agtggtccgtggcgggtgtcgttgcggtgggccctggactctgagaagttcaacgagtgg
atgaacccccaggactatgaagcagatgagcagaaagctaagcaggttgcagcagcagag
gcggcggcggccctgggcaacaagcgcgccgcgcagctggcggtggcgcaggcggcggcc
ctggcgggcgccaagcgcatccgcaccgacgccgaggtggacgcgtcagacccaggggtc
gaggtggcgcctggtgcggtgaagcggcgtgtgatcaatcctcacaagcctgtgctggac
ggcacggccagcgctgagaacatatcacagggacagctggaccccactgcgcccacccct
atgttggagcgcctccccccagaccggcggcagcagcagcagcagcagcagcagcagcag
cagcagcagcaagagcagcagcagggtcaaggtgatgcagcatcggcggaagcggccgag
gggaccgcggagaaggttctcagcaggcgccttctgatgcccatgcacgcggcgtggttt
tcttttgtacaagtgcacaacaacgagaagaaggtgctgccagagttctgcagcaacagc
acgtcggggctcacgctcaaggcctacctgacgatgcgcaacggcctcgtggagctgtac
cgccagcagccgcaacggcggctgacgatggaggaggcctctcgggcgatggcccagtat
gaccccgcgattgttggcagggtataccgcttcctggagtcttggggcctcatcaactgg
ctcgcccccagggccatccccacgcccgcagccactgcccttcctgccggcactgacctc
gcgccatcagccgcgcctggcgcagagcgcccgcggctgccgtggggtgctgtgctcggc
gggggcgccggcgggagcgggctgctgcggctgaggttcccaaccgtcgcagaaggcgtg
gcggcggcatgtggcggcgggacgctcaacatgacacagcgcgaggcacgctcctccaag
cttgagtcggccaccacgctggccaccggccgccgccgctacttctgcagcgccatgccc
tgggttgactgcacccccctgcgctaccactgcaccaaggtgccgggcatcgacctctgc
ccccaagcgtatgctgagggacgatttccgcctggctgcagcgtggccgactttgcgcgg
ctggaaggcggggcggatcggaacgcgccggatgcaacagcaggcgccactgcctggacg
cctcaggagaccctgctgctgctcgagggcttggacatgcatggcgaccaatggccggct
gttgctgagcacgtgggcacgcacggcgttttggagtgcatcacgcacttcctgcagctg
cccatcgaggacgactttctggacgagctggagcgccgggcgacggccgcgcccgggcag
gatggcgacggtgcaggggtgccgcaggaagtggagcagcagcaacagctgctgcggcag
cgtgaggaggaggagggcatcaggttgttggacactctgtga
DBGET
integrated database retrieval system