Monoraphidium neglectum: MNEG_0168
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Entry
MNEG_0168 CDS
T05028
Name
(RefSeq) Replication protein A DNA-binding subunit
KO
K07466
replication factor A1
Organism
mng
Monoraphidium neglectum
Pathway
mng03030
DNA replication
mng03420
Nucleotide excision repair
mng03430
Mismatch repair
mng03440
Homologous recombination
mng03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MNEG_0168
03420 Nucleotide excision repair
MNEG_0168
03430 Mismatch repair
MNEG_0168
03440 Homologous recombination
MNEG_0168
03460 Fanconi anemia pathway
MNEG_0168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mng03000
]
MNEG_0168
03032 DNA replication proteins [BR:
mng03032
]
MNEG_0168
03400 DNA repair and recombination proteins [BR:
mng03400
]
MNEG_0168
Transcription factors [BR:
mng03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MNEG_0168
DNA replication proteins [BR:
mng03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MNEG_0168
DNA repair and recombination proteins [BR:
mng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MNEG_0168
MMR (mismatch excision repair)
MNEG_0168
DSBR (double strand breaks repair)
HR (homologous recombination)
MNEG_0168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
DUF223
tRNA_anti-codon
Rep-A_N
HTH_91
Motif
Other DBs
NCBI-GeneID:
25726286
NCBI-ProteinID:
XP_013906797
UniProt:
A0A0D2KCH5
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MTDVKLSAHKKWVFKCQDGSGGVMEGVLASQLARALDSGTLRLKGGDVIRATNYLCNKVN
ENEFKLVISDLEVTAAGRDSGAARDQAAASFGGDVAMAIKEEPQQQHTPAPSRPAFGTPG
PTPSPSEELRRTPAALPLSPVRGSGTPIAPSPASDALAFLGGGGTPVAAQTPRPGGGSGG
GGGTPIAVRETRAGVQPIAALNPYDTQWTIKAKVVRKMPARSFAGRGGQQRTFAVELADA
QGGQVQGTFWREAADKYCDSLAEGKVYYFSKFNVKVANKQYNLTEVEECADQGGIDIVAT
AEIVPLDRLPGYIGRKTAVDVLGVVLSMGQAGTVKRKADNSELPRRDVTLGDASGRSVVV
TLWNNNAHSPQLEGAEGQLLQITSVRVGDFNGCSASSGARSVLTLNPDTKEGRALRDWYA
SDGASCSFAPLGQGAAGGGAAGEGGRRGGKVNFLSDVVVEGADVPPPDAKATYANLLATV
VAINPDQTMFYLANPENGKKVVEQEGGKYWSESEGRTIESAEHRYVLSCRVADASGEAYV
NLFNREAEAVLGAKADAMASLRSGGEEGVARYNAALKAARWQTWVMNVQSAASRPGRLLL
RPPLTDAPYRPAASPVSPASPAQGRSREYNGERRMRYTVMQAYPLDYATESARLLAMING
MGGQ
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgtcaagctaagtgctcacaagaaatgggtgttcaagtgccaggatggatca
ggcggcgtcatggagggcgtacttgcgtcacagttggcgcgcgcgctcgacagcggcacg
ctgcgcctgaaaggtggcgacgtcatccgcgcgaccaattacttgtgcaacaaggtcaac
gaaaacgagtttaagcttgtgatcagcgatctggaggtaacggccgcggggcgcgacagt
ggtgcggcgcgcgaccaggccgcggccagcttcggcggcgacgtggcgatggcgataaag
gaggagccgcagcagcagcacaccccggctccgtcgcggcccgcatttgggacgcctggg
ccaaccccttcgccctctgaagagctcaggcgcacgcccgcagcgctgccgctgagcccc
gtccgcggcagcggcacccccatcgcgccatcgccagccagcgacgcgctggccttcctc
ggcggcggcggcacgcccgttgccgcgcagacgccgcgccccggcggcggatcgggcggc
ggcggcgggacgcccattgcggtgcgggagacgcgggctggcgtgcagccgatcgcggcg
ctcaacccctacgacacgcagtggacgatcaaggcgaaggtcgttcgcaagatgcccgcc
cgcagcttcgcgggccgcggcggccagcagcggacgtttgcggtggagctagctgacgca
cagggcgggcaggttcagggcaccttctggcgcgaggctgcggacaagtactgcgactcg
ctggccgagggcaaggtttactacttcagcaagttcaatgtaaaggtggcgaacaagcag
tacaacctgaccgaggtggaggagtgcgctgaccaggggggcatcgacatcgtcgccaca
gcagagatcgtgcccttggaccggctgcccggctacattggccgcaagaccgcggtggac
gtgctgggcgtggtgctgtcgatggggcaggcggggacggtcaagcgcaaggcagacaac
agcgagctgcccaggagggacgtcaccctgggtgacgccagcggccgtagcgtggttgtc
accctttggaacaacaacgcgcacagcccgcagctggagggcgcagagggccagctgctg
cagatcacctctgtgcgcgtcggggacttcaacggctgctctgccagcagcggcgcgcgc
agcgtgctgacgctcaacccggacaccaaagaggggcgcgcgctgcgcgactggtatgcg
tccgacggcgccagctgcagcttcgccccgttgggccagggcgcggcgggcggcggcgcg
gccggcgagggcgggcggcgcggcggcaaggtcaacttcctgtcggacgtcgtggtcgag
ggcgcggacgtgccgccgccggatgccaaggccacctatgccaacctgctcgccacagtg
gtcgccatcaacccagaccagacgatgttctacctggccaaccctgagaacggaaagaag
gttgtggagcaggagggcggcaagtactggtccgagtcggagggcaggaccatcgagtct
gcggagcaccgctatgtgctgagctgccgcgtggctgacgccagcggggaggcttacgtc
aaccttttcaaccgggaggcggaggcggtcctgggcgccaaggcggacgcgatggcctcc
ctgcggtctggcggcgaggagggggtggcgcgctacaacgcggcgctcaaggcggcgcgc
tggcagacctgggtcatgaacgtgcagagcgcggcgtcgcggccgggccgtctgctgctt
cggccgccgctgacagacgccccgtaccgccccgcggcgtcacctgtgtcacccgcgtcg
cccgcgcagggccgcagccgcgagtacaacggggagcggcgcatgcggtacacggtcatg
caggcgtaccccttggactatgcgacagagagcgcgcggctgctggctatgatcaacggg
atgggcggccagtga
DBGET
integrated database retrieval system
