KEGG   Monoraphidium neglectum: MNEG_0189
Entry
MNEG_0189         CDS       T05028                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
mng  Monoraphidium neglectum
Pathway
mng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MNEG_0189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mng03041]
    MNEG_0189
   04121 Ubiquitin system [BR:mng04121]
    MNEG_0189
Spliceosome [BR:mng03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    MNEG_0189
Ubiquitin system [BR:mng04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    MNEG_0189
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 25726307
NCBI-ProteinID: XP_013906789
UniProt: A0A0D2MZC7
LinkDB
Position
Unknown
AA seq 829 aa
MATTGEGDVALSIEETNKLRASLGLKPLSLEPPKQQQRAERKAPAEELKPDADAIRAKLA
EARDKRRREQELQQTRGLGEAGGDADDAATWVVKMRQQPQQPPAKRQQREVGGDRRGRQR
RSGDGGGGDDEERDASASAAELAGARVRHDADELAEGETMVLTLADAPILDAAGGLNDAG
DELEEVARAQDKARAKARRAAGKEAKPLWAEDGNVRSLLDKYDEEDEEAGFVLDAAGAAA
AAAARQDKVRERLAAAAAALDAVAAPAMGGAVDYMTAEEAAASAGGGLKKKKKKRKLRTT
RAAADEDTADGGGSAGGGEGGLDLDALEAAAKAEGGGDLGSREARQQRREALEAAAAADA
ADRAARFQRAVERTNWASEALRAPGPVGDEEDEAEAELAESLSRVRRLAQRSSSTAVPGG
DSNGSGRPAPESVEEIAQRLGKKRAEDEERLRDELAAGGSDLFSAATEFVRNIGGAGDDN
EGEQQRGGGGGGGGDAPYMDVEMEEAGQGRGQGQTEEEAQQNGNAGDAGGDGTTSTGAGI
GAATAKGRNYRKRSGWVSAEDEDAQQAGGEQHQQQQQQQQLLHKQQGRSAETTSGVSAVA
GERVIGRGLAGALGMLQDTGALKGPADWAGRTNEKKAVALIGLEDVYTGGKHEDRMARSI
EAALTQRDEFGRVMTPKERFRKLCHQFHGIAPSKNTEAHRQRKYLEDVAIKRATTSADPS
AELDRIRVLTQQLGTPYLPLDGKAALPGRGGDDDDGPALPVARGAKGGGKPQLGGGLTPL
VGDRKVEAMLGLKKPPQPAGGRGGAAGGGGATGGRGSGGMPPPRARGKP
NT seq 2490 nt   +upstreamnt  +downstreamnt
atggcgaccacgggcgagggcgacgtggcgctgagcatcgaggagaccaacaagctgcgg
gcctccctgggcctgaagccgctgtcactcgagccgcccaagcagcagcagcgcgccgag
cgcaaggcgcccgccgaggagctcaagcccgacgccgatgccatccgcgcaaagctggca
gaggcacgggacaagcgacggcgagagcaggagctgcagcagacacgcggcctgggagag
gcaggcggagacgcggacgacgctgctacatgggtagtcaagatgcgccagcagccgcag
cagccaccagcaaagcgtcagcagcgcgaggtgggcggagataggcgtggccggcagcgg
cggagtggcgatggtggcggcggcgacgacgaggaacgggacgccagtgccagcgccgcg
gagcttgcaggcgctcgcgtgcgccacgacgccgacgagctggctgagggcgagaccatg
gtgctgacgctggccgatgcgccgatcctggacgcagcgggcggcctgaacgacgccggt
gacgagctggaggaggttgcgcgtgcgcaggacaaggcgcgcgctaaggcgcgccgcgcg
gccggcaaggaggccaagccgctgtgggccgaggacggcaacgtgcgttccctcctggac
aagtacgacgaggaggacgaggaggcgggctttgtgctggacgcggctggggcagccgct
gcagcggctgcacgccaggacaaagtccgagagcgcctggcagccgcggcggcggcgtta
gacgctgttgcggcccctgcgatgggcggggccgtggactacatgaccgccgaggaggcc
gcggcatcggcgggcggcgggctgaagaaaaagaagaaaaagcggaagctgcgcactaca
cgtgctgccgctgacgaggacacggcagacggcggcggcagtgctggtggcggcgagggc
ggccttgacctggatgcgctggaggcggccgccaaggcggagggcggtggagacctgggg
tcacgcgaggcgcggcagcagcgccgcgaggcgctggaggcggctgcggcggcggatgca
gctgatcgcgccgcgcgcttccaacgtgctgtggagaggaccaactgggcatcagaagcg
ctgcgtgcgcctggccctgtgggtgacgaggaggacgaggcggaggcggagctggctgag
agcctcagccgcgtgcgaaggctggcgcagcgcagcagcagcacagcagtgcctggcggc
gacagcaacggcagtggcaggccggcgcctgagtctgttgaggagattgctcagcggctg
ggcaagaagcgtgctgaggatgaggagcgactgagggacgaacttgcagcgggaggttcg
gacctgttcagcgccgctacagagtttgttcgcaacatcggcggcgcgggcgatgacaac
gagggcgagcagcagcgtggcggcgggggcgggggtggtggcgacgcgccctacatggac
gtggagatggaggaggcgggccagggcaggggccaagggcagacagaggaggaagcacag
cagaatgggaacgccggcgacgctgggggggacggcaccaccagcaccggcgccggcata
ggtgccgccactgccaaggggcgcaactaccgcaagcgcagcggctgggtgtctgcagag
gatgaagacgcgcagcaggcgggcggcgagcagcaccagcagcagcagcagcagcagcag
ctgcttcacaagcagcaggggcgttcagcagagaccaccagcggcgtgtctgccgtggca
ggcgaacgtgttattggccgcggccttgctggggcgctgggcatgctgcaagacactggg
gctctcaaaggccccgcggactgggcggggcgcaccaatgagaagaaggccgtggcgctg
atagggctggaggatgtgtacacgggcggcaaacatgaggaccgcatggcgcgcagcata
gaggcagcgttgacccagcgcgacgagtttggccgtgtgatgacgcccaaggagcgcttc
cgcaagctgtgccaccagttccacggcatcgcgccgtccaagaataccgaggcgcaccgg
cagcgcaagtacctggaggacgtcgccatcaagcgcgccaccaccagcgcagaccccagc
gcggagctcgaccgcatacgcgtgctgacgcagcagctgggcacgccctacctcccgctg
gacggcaaggctgcgctgccaggccgtggcggcgacgatgatgacgggcctgcactgccc
gtcgctcgcggggccaaggggggcggcaagccccagctgggaggcggcctaacgccgctg
gtcggcgacaggaaggtggaggcgatgctgggcctgaagaaaccacctcagccagcgggc
gggcgcggcggcgccgccggcggtggtggcgccacaggtggacgcggcagtggcggcatg
ccccccccaagggccagaggcaagccgtag

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