Monoraphidium neglectum: MNEG_0494
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Entry
MNEG_0494 CDS
T05028
Name
(RefSeq) putative ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mng
Monoraphidium neglectum
Pathway
mng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MNEG_0494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mng03019
]
MNEG_0494
03012 Translation factors [BR:
mng03012
]
MNEG_0494
Enzymes [BR:
mng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MNEG_0494
Messenger RNA biogenesis [BR:
mng03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
MNEG_0494
Translation factors [BR:
mng03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
MNEG_0494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
HA2_C
HA2_N
S1
TFIIA
Motif
Other DBs
NCBI-GeneID:
25726612
NCBI-ProteinID:
XP_013906464
UniProt:
A0A0D2MY89
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MAGVDFLLTALRRLLLRRRDLRLVLMSATASPDQYDEYFKDAGGVQWVHIEGRTFEVQQF
FLEDLFALQLAAGQRPRSVALASHVRSRFADKARPRQGDDIMLGFEVDPFEYEGVYPPEV
PELLKKWAGDVSHWAWQDREEAHVAAVVGAIEYVCRHEEEKGAILVFLTGIKMISDVMDA
LRALDGLGDVIMTVPLHSVLAETDQDLAFRPAPPGVRKVILATTIAESSLTFEDVVFVID
GGRHNSLAYDAVNAIPSLGPQWVCKAALWQRRGRAGRVRPGKSFHLLPRAMAERHLPDYE
APEVQRVPLEESCLLARSLGFGIAPFMAATPSPPDARLVASAVATLESLGALDSRQALTP
LGRLLALLPTAPQLGRMVVYGAVLGVLDPVLTVAAVADGDSKPLVRLPNERQGGALQFEQ
HREIARGLRCHLREQRRQQQQQQQQQQERQDPEQQQQWEQEEPTAAKAAHDAGAPRERRP
VGSGGAPRAGRIVEGTVLSSDAAGATIELDGGGGRGFLPRPEGVLRGAMRLLTGSHADIG
TVSDHLAAVKIFKVGSRDQTWLGLLE
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgttgactttttgctgaccgcgctgcggcggctgctgctgcggcggcgcgac
ctgcggctggtgctgatgagtgccacggccagcccggaccagtacgatgaatacttcaag
gacgcaggtggtgtgcagtgggtgcacatcgaggggcggacctttgaggtgcagcagttc
ttcctggaggacctcttcgcactgcagctcgcagccggccagaggccccgctccgtggcg
ctggcaagccacgtccgcagccgcttcgccgacaaggcccgcccccggcagggggacgac
atcatgctcggttttgaggttgacccctttgaatacgagggcgtctaccccccagaggtc
cccgagctgctcaaaaaatgggcgggtgacgtcagccactgggcgtggcaggacagggag
gaggcgcacgtggcggcggtggtgggggcgatagagtacgtgtgcaggcacgaggaggag
aagggcgccatcctggtgttcctcaccggcatcaagatgatatctgacgtcatggacgcc
ctcagggccctggacggcctcggtgacgtcatcatgaccgtacccctgcacagcgtgttg
gctgagacagaccaagacctggcgttcaggccggcgccgccaggcgtgcgcaaggtgatc
ctggccaccaccatcgcggagagctcgctgacgtttgaggacgtcgtcttcgtcatcgat
ggcgggagacacaacagcctcgcatacgacgcggtcaacgcgatcccctccctgggtccc
cagtgggtctgcaaggccgccctctggcagcgccgcggccgcgcggggcgcgtgcggccg
ggcaagtcgttccacctcctgccgcgcgccatggcggagcgccacctgccagactacgag
gctccagaggttcagcgcgtgccgctggaggagtcctgcctgctggcgcgcagcctcggt
ttcggcatcgcccccttcatggccgccacgcccagcccgccggacgcgcgcctcgtggcc
tccgcggtcgcgacgctcgagtccctaggcgccctggactcgcgccaggcgctgaccccc
ctgggccgcctgctggcgctgctgccgaccgcgccgcagctggggcgcatggtggtgtat
ggcgcagtgctgggggtgctcgaccccgtgctgactgtggcggcggtggcggacggggat
tcgaaaccgctggtccgcctgcctaacgagcggcaggggggggcgctgcagttcgagcag
caccgggagatcgcaaggggcttgagatgccacctgcgggagcagcggcggcagcagcag
cagcagcagcagcagcagcaggagaggcaggacccggagcagcagcagcagtgggagcag
gaggagccgacagccgccaaggcagcccacgacgccggcgcgccgcgcgagcggcggccc
gtcggcagcggcggcgcgccgcgggctggccgcattgtggagggcactgtcttgtcttcc
gacgccgcgggcgcgacgatcgagctcgacggcggcggcggccgcgggttcctgccgcgc
cccgagggtgtgctacgcggggccatgaggctgctgactggcagccacgcggacatcggc
actgtgagcgaccacttggctgcggtgaagattttcaaggtggggtctcgggatcaaacc
tggttggggctgctggaatga
DBGET
integrated database retrieval system
