KEGG   Monoraphidium neglectum: MNEG_11208
Entry
MNEG_11208        CDS       T05028                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
mng  Monoraphidium neglectum
Pathway
mng03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mng00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MNEG_11208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mng03019]
    MNEG_11208
Messenger RNA biogenesis [BR:mng03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MNEG_11208
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     MNEG_11208
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 25728447
NCBI-ProteinID: XP_013895775
UniProt: A0A0D2MQ29
LinkDB
Position
Unknown
AA seq 140 aa
MAAVPLGAGAGAPPAPPQLDYPPPGTALVEELDKKLLIQLRDGRKIIGVLRSFDQFANLV
LEEAVERIIVGAQYSDIPLGMYLLRGENLVLMGQLDPNHEAPPGMRLVAEPVIREALRAE
REEARLRGTMRARFDFLEME
NT seq 423 nt   +upstreamnt  +downstreamnt
atggccgccgtccccctcggtgccggcgccggcgcgccgcccgcgccgccgcagctcgac
tacccgccccccggcaccgctctcgtcgaggagcttgacaagaagctgctcatccagctg
cgcgacggccgcaagatcatcggcgtgctgcgcagctttgaccagtttgccaacctcgta
ctggaggaggccgtggagcgcatcatcgtcggcgcccaatacagcgacatccccctgggc
atgtacctgctgcgcggcgagaacctagtgctcatgggccagctcgatcccaaccacgag
gcgccgccgggcatgcggctggtggcggagcccgtcatacgcgaggcgctgcgcgcggag
cgggaggaggcgcggttgagaggcaccatgcgcgcgcggttcgactttttggaaatggag
tga

DBGET integrated database retrieval system