Monoraphidium neglectum: MNEG_11275
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Entry
MNEG_11275 CDS
T05028
Name
(RefSeq) transcription initiation factor TFIID subunit D2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
mng
Monoraphidium neglectum
Pathway
mng03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MNEG_11275
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mng01002
]
MNEG_11275
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mng03021
]
MNEG_11275
03036 Chromosome and associated proteins [BR:
mng03036
]
MNEG_11275
Peptidases and inhibitors [BR:
mng01002
]
Metallo peptidases
Family M1
MNEG_11275
Transcription machinery [BR:
mng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MNEG_11275
Coactivators
SAGA/TFTC/STAGA complex
MNEG_11275
Chromosome and associated proteins [BR:
mng03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
MNEG_11275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
Motif
Other DBs
NCBI-GeneID:
25728521
NCBI-ProteinID:
XP_013895708
UniProt:
A0A0D2KLT7
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MATSPQLRRSRAIFPCVDGPVYYEPGSAFVSPHTYDLSLIVGPDDVAVASGTLVQQTQAV
EQPQQQQRNSGGSGAQRVVARTFEYSIDVPTLPQHVLFAAGPFEVLAAQQLFGGGATARG
GGGGAAAAAAGAGGVAAAAIAGPPVVTAFYPRAGSRTASAGRQPGEAQQQHQEWRNNSGG
REDGAAAFAALSLTGGTGAEGAVGPAAVLATLRPLALVLRQCEKHLGCRAPFSHLQVAVL
PADCVAAPYLSGLGCILLSSDLVAAEGSIEAAMDVVAALAAAISRQFFGVLMLPPAPEDA
WLLEGLASWLEGGALRSLLGGNEVAYRRWQERVALAAVDDGVQLAPLSQARSCARVLACA
AAALGWVLPGSERERERERGGRRDRDRDRDGDEDGGGGGGGARGAAAYQGPSVNKDTTTG
WGLAYGSQSLEPWEARRWKAAAVVLMAERRIGEGEEFKRMLERVVVAARPEVAAVESADP
IKPRLQLSTAWFLKNMRRKAEGSATTAKEDANAFRARWVNGAGMPVLQGAYGYDARNSVL
QVALRQGGGLQCLKAALRSKAKAEGLKRAGGCAVRRMARADAAARCGVADETGAGRRPNK
AAGSYARPGAGAPALALSAAVARHATPTLVMVRELGGEVEHLLSLGVDEALALRKLEVSL
DRQSVKRGPGRRPKEPKDPATGPGVNPDSAEKLGIPESELAGVAALWVRLDPNLEWLADV
RMAQPLNMWRWQLQHSKDVISQAQAVAGLAALQPVHEGVIDVLAAALRRPTLFCRVRADA
ALALGATAGDATHMRGAHALVGYWREQCYDPVTAALRPNCFADTAEYIVLRALPAALALV
RDSSNQTPDWIIHQLLEALRDNDNSHNAFDDAHWLAGLVSALGSCRPAEKRQLAAILSAI
DRQLAHEAVVGTHQCVLGVACLRAVADLACRVVAPPEAAMSDGLRAAFGADLHGLTAHAA
AAAARALLADVRRLLRRYAAPAAPRHMRAAAQECLMQSNVLHFDSY
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttcaccgcagctgcgccgcagccgcgccatcttcccatgcgtcgacgggccc
gtgtactatgagcccggctctgcgttcgtctcgccgcacacgtatgacctgtctttgatc
gtcggccccgacgatgtggcggtggcgagcggcacgctggtgcagcagacgcaggctgtc
gagcagccacagcagcagcagcgcaacagcggcggcagcggcgcgcagcgcgtggtggcg
cgcacgtttgagtattcaatagatgtcccgacgctgccgcagcatgtgctgttcgccgcg
gggccgtttgaggtgctggctgcgcagcagctctttggcggcggggcgacggcgcgcggc
ggtggcggcggggcggcggccgctgcggcaggggccggcggtgtggccgccgctgctatt
gcggggccgccagtggtcacggcgttctatccgcgggcggggtcgcgcaccgcgagcgcc
ggccggcagccgggcgaggcgcagcagcagcatcaggagtggcgcaacaactccggcggg
cgggaggacggggcggcggcgttcgcggcgctgagcctcacgggcggcacgggcgccgag
ggggcggtcgggccggcggcggtgctggcgacgctgcggccgctggcgctggtgctgcgg
cagtgcgagaagcacctcggctgccgggcgccgttttcgcacctgcaggtcgccgtgctg
cccgcggattgcgtggccgcgccctacctgtccggcctcggctgcatcctattgagctcc
gacctggtggcggcggagggcagcatcgaggccgccatggacgtggtagcggcgctggcg
gccgccatctcgcggcagttcttcggggtgctcatgctgccgccggccccagaggacgcg
tggctgttggagggcctcgcctcctggctggagggcggcgcgctgcgctcgctgctgggg
ggcaacgaggtggcgtaccggcgctggcaggagcgggtcgcgctcgcggcagtcgacgac
ggggtgcagctggcgccgctgagccaggcgcgctcctgcgcgcgtgtgctggcgtgcgcc
gctgcagcactgggctgggtgctgccgggcagcgagcgggagcgcgagagggagcgcggc
ggccgccgcgaccgcgaccgcgaccgcgacggggacgaggacggcggcggcggcggcggc
ggggcgcgcggggcggccgcgtaccagggaccgagcgtgaacaaggacaccaccacaggg
tggggcctcgcatacggcagccagtccctcgagccgtgggaggcgcgccgctggaaggcg
gccgcggtggtgctgatggcggagcgccgcatcggcgagggggaggagttcaagcgcatg
ctggagcgcgtcgtggtggcggcgcggcccgaggtcgcagcggtcgagtcggccgaccct
atcaagccccgcctgcagctgagcaccgcctggttcctcaaaaacatgaggcgcaaggcc
gagggcagcgccaccacagccaaggaggacgccaacgcgttccgcgcccgctgggtcaac
ggcgccggcatgcccgtgctgcagggcgcgtacgggtacgacgcgcgcaacagcgtgctg
caggtcgcgctgcggcagggcggggggctgcagtgcctcaaggcggcgctgaggtcaaag
gccaaggcggagggcctcaagcgggctggcggttgtgcagttcggcgcatggctagggcc
gacgcggcggcgcggtgcggcgtggcggacgaaactggcgctggccgccggccaaacaaa
gcggccggcagctacgcgcgtcctggcgcaggcgcccctgctttggcgctctccgcagcc
gtcgcccgccacgccaccccgacccttgtcatggtgcgggagcttgggggtgaggtggag
cacctgctgtccctgggggtggacgaggccctggcgctgcgcaagctggaggtcagcctg
gacaggcagtccgtcaagagggggccggggcggcgccccaaggagcccaaggaccctgcc
accggccccggcgtcaaccccgactctgccgagaagctgggcatcccagagtcagagctg
gcgggcgtggcggcgctgtgggtgcggctggaccccaacttggagtggctggcagacgtg
cggatggcgcagcccctcaacatgtggcgctggcagctgcagcactccaaggatgtaatc
agccaggcccaggccgtggccggcctggcagcccttcagccggtgcatgagggcgttatt
gatgtcctcgccgccgcgctgcgccgcccgacgctgttctgccgcgtgcgcgccgacgcg
gcgctcgcgctgggcgcgaccgcgggggacgcgacgcacatgcggggcgcgcatgcgctg
gtcggatactggagagaacagtgctacgacccggtcaccgcagcgctgcgccccaactgc
ttcgctgacacagcggagtacatagtgctgcgcgcgctgcccgcggccctggccctcgtc
cgtgactcatccaaccagacgcccgactggatcatccaccagctgctggaggccctgcgc
gacaacgacaactcccacaacgcattcgacgacgcccactggctcgccggcctcgtcagc
gccctcggcagctgccgccccgccgagaagcgccagctggcggcgatcctgtcggccatc
gaccgccagctggcgcacgaggccgttgtgggcacccaccagtgcgtgctcggggtcgcg
tgcctgagggcggttgctgacctggcgtgccgcgtcgtcgcgccgcccgaggcggcgatg
agcgacgggctgagggcggctttcggggcggacctgcacgggctgaccgcgcacgcggcc
gcggcggcggcgcgcgcgctgctggcggacgtgcggcggctgctgcggcgctacgcggcg
ccggcggcgccgcggcacatgcgggcggcggcgcaggagtgcctgatgcagtctaatgtg
ttgcattttgattcatattga
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integrated database retrieval system
