Monoraphidium neglectum: MNEG_1305
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Entry
MNEG_1305 CDS
T05028
Name
(RefSeq) hypothetical protein
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
mng
Monoraphidium neglectum
Pathway
mng03018
RNA degradation
mng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MNEG_1305
09123 Folding, sorting and degradation
03018 RNA degradation
MNEG_1305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mng03019
]
MNEG_1305
03041 Spliceosome [BR:
mng03041
]
MNEG_1305
Messenger RNA biogenesis [BR:
mng03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MNEG_1305
mRNA degradation factors
5'-3' decay
Lsm complex
MNEG_1305
Spliceosome [BR:
mng03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
MNEG_1305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
25730473
NCBI-ProteinID:
XP_013905672
UniProt:
A0A0D2K926
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MIAQKRGPPAANPSHLLPSELIDRCIGSRIWVIMKGDKEIVGTLRGFDVYVNMVLEDVAE
IEITPEGRIINRLDTILLNGNNIAVLVPGGQPDDLA
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcccaaaaacgcggcccccctgcagccaacccgtctcacctgttgcccagcgag
ctcatcgaccgctgcatcgggtctcgcatctgggtgatcatgaagggcgacaaggagatt
gtgggcaccctgcgcggctttgacgtgtacgtgaacatggtgctggaggatgtcgcggag
atcgagatcacgccagagggccgcatcatcaaccgcctcgacaccatcctgctcaacggc
aacaacatcgccgtgctcgtgccgggcgggcagccggacgacctcgcttga
DBGET
integrated database retrieval system