KEGG   Monoraphidium neglectum: MNEG_1322
Entry
MNEG_1322         CDS       T05028                                 
Name
(RefSeq) Transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
mng  Monoraphidium neglectum
Pathway
mng03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MNEG_1322
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mng03021]
    MNEG_1322
   03036 Chromosome and associated proteins [BR:mng03036]
    MNEG_1322
Transcription machinery [BR:mng03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     MNEG_1322
   Coactivators
    SAGA/TFTC/STAGA complex
     MNEG_1322
Chromosome and associated proteins [BR:mng03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     MNEG_1322
    STAGA complex
     MNEG_1322
    TFTC complex
     MNEG_1322
    SAGA complex
     MNEG_1322
    SLIK complex
     MNEG_1322
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 EIF3I WD40_Gbeta Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st WDR55 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th DSE1_N Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_WDR19_1st Beta-prop_IFT140_1st TRM82_WD CFAP251_N Beta-prop_SPT8 ASA1 NBCH_WD40
Other DBs
NCBI-GeneID: 25730660
NCBI-ProteinID: XP_013905657
UniProt: A0A0D2K8Z8
LinkDB
Position
Unknown
AA seq 435 aa
MRREVFESIENRADVSPSEPPSCCFFTLTNSRQSCCSLAFDPWTRHAAAGFADSSIRLFN
LQSLGRARTLQAKQLQRRSDARRQRRQQQQPQQGGEDGWYDADEDPADEQEELEEELADL
ADRAATHLYGHTAAVHDLDFTADGQLLLSAAGDGAVRVWSPELRRCLAAYRGHVLPVWAV
AACPNGGYFVSGGADRTARIWATEVAARPLRVLAGHASDVDVVGWHPNSHYVATGGADRS
VRLWDVRRGRAARVIGGVGGGGGVTALAFAPDGRHLAAAAEDGSIGVYDIASAKRVALLE
GHEGPVWSLSYSRGAGSVLASGGADLTLRLWSAPAADNSMVALVAGAKAAAMVGSAGAPG
GARLSEDGTAAGGGGGGGGGGQQAQLGGGGGQGGQRPYQQLRVWRTRATPVAHVAFSPRN
LLLAGGAWALRPLRK
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgcgccgcgaagtcttcgagagcattgagaaccgcgcggacgtgtcgccctcggagccg
ccctcctgctgcttcttcaccctcaccaactcgcggcagagctgctgctcgctcgcgttt
gacccctggaccaggcacgcggcggccgggtttgcggactcgtccatccggctgttcaac
ctgcagtccctgggtagggcgcgcacccttcaggcaaagcagctgcagcggcgctccgac
gcgcggcggcagcggcggcagcagcagcagccgcagcagggaggggaggacgggtggtac
gacgctgacgaggacccggcggacgagcaggaggagttggaggaggagctcgctgacctg
gcggaccgcgccgccacccacctgtacggccacaccgcagccgtccatgacctggacttc
accgcagacggccagctgctgctctcggcggccggcgacggcgccgttcgcgtgtggagc
cccgagctgcggcgctgcctcgcagcgtaccgcgggcacgtgctgccggtgtgggcggtg
gcggcttgccccaacggcggttactttgtgagcggcggcgcggacaggacggcgcggatc
tgggcgacagaggttgccgcgcggccgctgagggtgcttgcaggccacgcgtcggacgtg
gatgtcgtggggtggcaccccaacagccactatgtcgcgaccggcggcgccgaccgcagc
gtgaggctgtgggacgtccgccgcggccgcgcggcgcgcgtcatcggcggcgtcggcggc
ggcggcggcgtgacggcccttgcgttcgcgccggacgggcgccacctggcagcggcggcg
gaggacggcagcatcggcgtctacgacattgcctcggcaaagcgcgtggccctgctggaa
ggccacgagggccccgtctggtcgctgtcatacagccgcggcgctggctccgtcctggcc
tctggcggcgccgacctgaccctgcggctgtggagcgcccccgccgcagacaattcgatg
gtggcgctcgtagcgggggcgaaggctgcggcgatggtgggctctgctggtgctcctggc
ggcgcgcgcctgtcggaggacggcacggcggccggcggcggcggcggcggcggcggcggc
ggtcagcaagcgcagctcggtgggggaggcgggcagggggggcagcggccgtaccagcag
ctgcgcgtgtggcgcacgcgcgcgacgccagtggcgcacgtggcgttcagcccgcgcaac
ctgctgcttgccgggggtgcgtgggcgctgcggccgctgcgcaagtag

DBGET integrated database retrieval system