KEGG   Monoraphidium neglectum: MNEG_1375
Entry
MNEG_1375         CDS       T05028                                 
Name
(RefSeq) THO complex subunit 5
  KO
K13174  THO complex subunit 5
Organism
mng  Monoraphidium neglectum
Pathway
mng03013  Nucleocytoplasmic transport
mng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MNEG_1375
  09122 Translation
   03013 Nucleocytoplasmic transport
    MNEG_1375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mng03019]
    MNEG_1375
   03041 Spliceosome [BR:mng03041]
    MNEG_1375
Messenger RNA biogenesis [BR:mng03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     MNEG_1375
Spliceosome [BR:mng03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    MNEG_1375
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 25731243
NCBI-ProteinID: XP_013905590
UniProt: A0A0D2NQG8
LinkDB
Position
Unknown
AA seq 379 aa
MDALTGLVAHIVELKKKQADPVAIQDACRAGTVALLRARQEHRAAALSGEAARERAAAAK
AGLDAAVLRLNSLLYEKQFYVREIAACTSYRSAYPDEEIQLPPLEAEALAGAGAVAGRAQ
LAPHALMLSRLTAELNARKALGDALKSARAERQREAGRAAADKARLSALKAPLRGLEQAG
GPLLDVLGPRLQLRAPERAATLLPAPLWAINYQFAAARDALGLPIGVRLEGDAAEAAARL
AAAGAGAPGARGGDSGSGGGEVAQGPASKRRRQEEAAGVLYEVHPLSVVVSLLSSRQPQG
QQQQPLLEVRFDYYQRPGLVGACCCGGSGGGAGGGAALLSALFPGDEGDGEGYEVLAQLA
GPGPYQFGSAAAPARPFRL
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggacgcgctgacgggccttgtggctcatatagttgagctcaagaagaagcaggcggac
ccagtggccatccaagacgcctgccgcgctggcactgtcgcgctgctgcgcgcgcgccag
gagcatcgtgcagccgccctctccggcgaggcggcgcgcgagcgcgccgcggccgccaag
gccggcctcgacgccgcggtgctgcgcctcaacagcctcctgtatgagaagcagttctac
gtccgcgagatcgccgcatgcaccagctaccgcagcgcatacccggatgaggagatccag
ctgccgccgctagaggcagaggccctcgccggcgcaggcgcggttgcgggcagagcgcag
ctagccccgcacgcgctgatgctgtcgcgcctcacggcggagctcaacgcgcgcaaggcg
ctcggcgacgcgctgaagagcgcgcgcgcggagcggcagcgcgaggcgggccgcgcggcg
gcggacaaggcgcggctctcggcgctcaaggcgccgctgcgcgggctggagcaggcgggg
ggccccctgctggacgtgctggggccgcggctgcagctgcgcgcgccggaacgagcggcg
acgctgctgccggcgccgttgtgggccatcaattatcagtttgcagcggcgcgcgacgcg
ctgggactgcccattggtgttcggctcgagggggatgcggcagaggcagctgcccggctc
gcggcggcaggggccggcgcgccaggcgctcggggcggcgatagcggcagcggcggcggg
gaggtggcgcaggggccagcgagcaagcggcggcggcaggaggaggcggctggggttctg
tatgaggtgcacccgctgtcggtggtggtgtccctcctgagcagccggcagccgcaggga
cagcagcagcagccgctgctcgaggtccgattcgactattaccagaggccgggcctcgtg
ggcgcctgctgctgcggcggcagcggcggcggcgcgggcggcggggctgcgctgctgagc
gccctcttccccggcgatgagggggatggcgagggctacgaggtcctggcgcagctggcg
gggccggggccctaccagtttggcagcgcggcagcgccggcccgtcccttccggctctag

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