Monoraphidium neglectum: MNEG_15479
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Entry
MNEG_15479 CDS
T05028
Name
(RefSeq) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mng
Monoraphidium neglectum
Pathway
mng03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MNEG_15479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mng03021
]
MNEG_15479
Transcription machinery [BR:
mng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MNEG_15479
Prokaryotic type
Archaeal type
TFB
MNEG_15479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_Ribbon_TF
TFIIB
Lar_restr_allev
Zn_Ribbon_Prim
Zn_ribbon_tTFIIB
Zn_ribbon_PaaD
Zn_ribbon_3
Ribosomal_S27e
zf-IS66
zf_Rg
Zn_ribbon_IS1595
Auto_anti-p27
Zn_ribbon_Top1
Motif
Other DBs
NCBI-GeneID:
25733144
NCBI-ProteinID:
XP_013891505
UniProt:
A0A0D2MAW9
LinkDB
All DBs
Position
Unknown
AA seq
170 aa
AA seq
DB search
MAMATEGVGPRLERSCPNCGGKDMVEVHSEGDIVCKGCGLVVEDHIIDERSEWRTFGDKD
KEGDDPSRVGGATNLLLDDGGLGTTIGRVQGDGGASFALNKMHMRQNNQMRQLKSAFAGI
GEMCSKLNQTDAVKSAACEIYKNVHDNKVLRGRKSELAYAACVLVASRQG
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcgacggagggcgtcgggccgcgtttggagcgctcctgccccaattgcggc
ggcaaggacatggtggaggtccactcagagggcgacattgtgtgcaagggctgcggcctg
gtggttgaagaccacatcatcgacgagcgctccgagtggcgcaccttcggcgacaaagac
aaggagggcgacgacccctcgcgcgtcggcggcgccaccaacctcctgctagacgacggc
ggcctcggcacgaccatcgggcgcgtccagggcgacggcggcgcatcgttcgcgctgaac
aagatgcacatgcggcagaacaaccagatgcggcagctcaagtcggcgtttgcggggatc
ggggagatgtgctcgaagctcaaccagacggatgctgtcaagtcggccgcctgcgaaatc
tacaagaacgtgcacgacaacaaggtgctgcgcggccggaagagtgagctcgcctacgcc
gcgtgcgtcctggtggccagcagacagggttga
DBGET
integrated database retrieval system
