KEGG   Monoraphidium neglectum: MNEG_16182
Entry
MNEG_16182        CDS       T05028                                 
Name
(RefSeq) Splicing factor 3B subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
mng  Monoraphidium neglectum
Pathway
mng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MNEG_16182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mng03021]
    MNEG_16182
   03041 Spliceosome [BR:mng03041]
    MNEG_16182
   03036 Chromosome and associated proteins [BR:mng03036]
    MNEG_16182
Transcription machinery [BR:mng03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     MNEG_16182
Spliceosome [BR:mng03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    MNEG_16182
 Complex B
    MNEG_16182
 Complex C
   U2 SnRNP specific factors
    MNEG_16182
Chromosome and associated proteins [BR:mng03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     MNEG_16182
    TFTC complex
     MNEG_16182
SSDB
Motif
Pfam: Beta-prop_RSE1_1st
Other DBs
NCBI-GeneID: 25733917
NCBI-ProteinID: XP_013890801
UniProt: A0A0D2LP57
LinkDB
Position
Unknown
AA seq 247 aa
MIAAVEKQKFVYVLNRDAAANLTISSPLEAHKSHNVVFSAAALDCGFDNPVFATIELDYS
EVDQDPSGEAAQGAQKQLVYYELDLGLNHVVRKWSDAVDNGANLLIPVPGGGDGPGGVLV
AAENFLLYRHQGHEELRAVLPRRDVLPADRGVLIVSYAAHKKKAYSFFLLQSEYGDIYKA
TLQHSGDTVTNLTVKYFDTLPPTASLAVLKTGFLFAASEFGSHALYQFIRRPGHKKCCAG
PVRRALC
NT seq 744 nt   +upstreamnt  +downstreamnt
atgatcgccgccgtcgagaagcagaaattcgtatacgtcctgaaccgcgacgcggcggcc
aacctcacgattagcagcccgctggaggctcacaagagccacaacgtggtgttcagcgcg
gcggcgctcgactgcgggttcgacaacccggtgtttgcgaccatcgagctggactactcg
gaagtagaccaggacccttccggcgaggccgcgcagggcgcccagaagcagctggtgtat
tacgagctcgacctcggcctcaaccacgtggtgcgcaagtggagcgacgccgtcgacaac
ggcgccaacctgctcatccccgtgcccggcggcggcgacggccccggcggcgtgctggtc
gccgccgagaacttcctgctgtaccgccaccagggccacgaggagctgcgggcggtgctg
cctcggcgcgacgtcctgccggctgaccggggggtgctgatcgtgtcttacgcggcccac
aagaagaaggcctactccttcttcctgctgcagtccgagtatggagacatctacaaggcg
accctgcagcactctggcgacacggtcacgaacctgacggtcaagtactttgacacgctg
ccgccgaccgccagcctggcggtgctcaagaccggcttcctgtttgccgccagcgagttt
ggcagccacgccctctaccagttcatccgacggcccgggcacaaaaagtgttgtgccggt
ccagtgcgccgggctctctgctag

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