Monoraphidium neglectum: MNEG_2405
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Entry
MNEG_2405 CDS
T05028
Name
(RefSeq) Nuclear pore complex protein Nup98
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mng
Monoraphidium neglectum
Pathway
mng03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MNEG_2405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mng03019
]
MNEG_2405
03036 Chromosome and associated proteins [BR:
mng03036
]
MNEG_2405
Messenger RNA biogenesis [BR:
mng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MNEG_2405
Chromosome and associated proteins [BR:
mng03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MNEG_2405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
25735283
NCBI-ProteinID:
XP_013904570
UniProt:
A0A0D2NLE8
LinkDB
All DBs
Position
Unknown
AA seq
1785 aa
AA seq
DB search
MSAPGFGAPASTPAFGGFGAASTPAFGAATSSPAFGAGGGGAFGAGGFGAAAPGGAAQGT
RVVPYQKHQDKDQSGGTSSGGPVYYNTITAMPQYQNKSVDELRWEDYQAGVKNASSAPPP
AAGGFGAPASSAAFGGFGATPAPAFGAASQPAANPFGTPASSPFGGGFGAASTPAFGAQA
SSPFGGGTPAFGASTPAFGGFGAASTPAFGAASSASLFGAASTPGGFSFGGSTPAFGTAT
STPAFGAPASTPSFGGFGASPSPSPFGASPASAASPFGTPSPSPFGSTTPAFGAAPSSSP
FGGFGASPPASSAPAFGGFGSAFGAKPATSPGFGFGASSSPAFGASAPAASTFSFSSASA
SGFGAGFGAASSTPAFSFSQPASQPAGGGFNFGNFGSSFGAPAQGAAGAQPAAPAVQPAG
VGQAPYGQLSALPSVNVPEPKVGISARPARQAITTLRPSPLLMLRSATPRFGAGPAPRSA
ASPGPSPPSLSLGASAGAVSSPAAALLPARENPHRLFIREPPPSTSASPSRSSLTPSTPV
TGGAAGGGGATTPSPAAAAAGSGIPAGRPRSAERLSNGGATARDFKAAADGSPANGAAAA
ASDLLPKLGSLAMAGYSIEPSLRQLQALAASDPGALAGVTGFSLSRRGVGSLRWLVPVDV
RGLELDQIARIDPGEVAVYVDTVKPPVGCELNTRCEVTLLNVHKKKGGQIVTDPVSVAAF
EKRLRRYCAEAGGEFVAYKPDGGVWRFKVEHFSRYGVPLDQEDDEDDEGQEGEEGGTLGG
AGPAAAANAGGSGAAGGGKGRRFGAPVVGGDSDLDEATVDGACSDGGEGDAPDSLMAGGD
EGDEAALDEQGEEAAYEAARLGAREVGADAGEVGEAAYYTGGPSRKRGYGHAARPPLSEG
RVAWGTEVEEADEAAGRGEPLQHSLPALLSLQPGQLAAMRDSFFRQGGAAAADAAASPDA
PQQQTPAALVVPAPSTARLAQVTALEAPLVPSPCEGMAVAGGGGNVCDAFMLMGRSFRAG
FGPGGAMAFPVNASATVGTAAPSVTVTQLSPLAAVRPAAQKPLEVDAQPGAAAQNAGGRV
GLVSALRRRTLAAFEAHLSMSRAEVDAGGKDGEGGGGGEGAEEDKEQASGQLAPRWQLVC
SRRQLPRLVKQQLAALGRRGDGDGDGQGTSAEMWQLLQVLFEHIEGEDGDCDEEDGDADE
DGDVDGGAGADAMSLEGSEGAEGRPSVLDASTSASRLASYKRRATLSGWLASKAGRAVRA
AVVAASAAGGREALLWALLHLVAGHQLGPAAALAAAAGDARLAVLLSVAGRHGAISSDIA
RQLQVWHSAGLWRDHFSQPRKLLVAVLSGRMGEAAAALQLDWTRALGLALWYSTPSTEGL
GAALNAYEAAFAGPARVAGVEPPVPAHARDPAAALPDSAANGYVTVGASGPVVSDAQYEL
LLLAARGVRGAGPGFVARLLRTAGRGTNPLDAAPGWVLSSVLAALGELPDTDMAGDPEPV
LLRLALDTVEQLLLLASGRDAALAVCWAVYVVVHLPPSLATAAARAAAVQSLLERTAPQW
ALDARAHKFLSGTLGLPPAWLEVAQATWAGYLGEDAAQLRHLLGAGDARAAHSLFCSAVA
PSLFLEASAVSARRLAALAEQLADLRDIVGPSWAVGGGLYHSWSRLFVLQGERQDGDWRR
DVAAEAAADGDAGVAAVLEECCLLAQQLVAAGRHLGRAVPPTQRAVLARMSDDVGAALGR
LSARTSGQASFIEDAAVATLRQGCALLGHHEPTLMAGLAAQLAVL
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcccgggtttggtgcgcccgccagcacgccggccttcggcggctttggggcc
gccagcaccccggcgtttggtgcggcaacaagcagcccggcgtttggcgccggcggtggc
ggtgcgtttggcgctggcggctttggggccgcggcccctggcggggcggcccagggcacg
cgcgttgtgccgtaccagaagcaccaggacaaggaccagagcggcggcaccagcagcggc
ggccccgtctactacaacaccatcacagccatgccgcagtaccagaacaagagcgtcgat
gagctgcgctgggaggactaccaggccggagtcaagaacgcctcgtcagcacctccaccg
gccgccggcggcttcggtgcccccgcatcgtcggccgcgtttggcgggtttggggcaaca
ccagcgccagcatttggagccgccagccagcccgccgccaacccattcggcactcccgcc
tcgtcgccatttggcggcggctttggtgctgcctccaccccagcatttggagctcaggcc
agcagcccgtttggcggcggcacacccgcgttcggtgccagcaccccggcttttggcggg
tttggggcagccagcacgcctgcgtttggcgctgccagctcggcgtcactgtttggggcg
gccagcaccccgggagggttcagcttcggcggcagcacccctgcttttggcacggccacc
agcacgccggcgtttggggccccagcctccactcctagctttggtggattcggggcgtcg
ccatcgccgtcgcccttcggcgccagtcctgcttcggccgcgtcgccctttgggacgcca
tcccccagcccttttggttccacgacgccagcatttggggcagcccccagcagctcgccg
tttggggggttcggcgcctccccgccagccagcagcgcacccgcctttggcggctttggc
tcagccttcggcgccaagcccgcgacctcgcccggctttgggtttggcgctagctcctcg
ccagcgtttggtgctagcgctcctgctgcaagtacattctctttcagcagcgcaagtgcc
agtggatttggcgccgggtttggggcagcgtcctcgacgcctgcgttttcgttctcccag
ccggcaagccagccggctggtggcggcttcaacttcggcaactttggatcttcttttggg
gctcctgcgcagggcgcggcgggcgcgcagcccgcggcccccgcagtgcaaccggcaggt
gtgggccaggccccgtacggccagctctctgcgctgcccagtgtcaacgtgcctgagccc
aaggtcggcatcagcgcccgaccagcgcgccaggccatcaccacactgcgcccctcgccg
ctgctgatgctgcgctcggcgacaccacgattcggcgccggccccgcgccccgcagcgca
gcgtcgcccggcccctcaccgcccagcctcagcctgggggccagcgccggagcggtgtcg
tcgccggcggccgcgctgctgccagcgcgagagaacccgcaccgcctcttcatccgcgag
ccaccgccctccacgagcgcgtccccctcccgcagcagcctcacgcccagcacccctgtc
acaggcggcgcagctgggggcggcggcgccaccacgccgtcccccgcggcggctgcggct
ggctcgggcatcccggctggccggccgcgcagcgcagagcgtctgagcaacggcggggcc
acagcccgcgatttcaaggcggctgcggacggctccccggccaacggcgctgcggccgca
gcgtctgacctgctgcccaagctgggctcactcgcgatggctggctacagcatagagccg
tccctgaggcagctgcaggccctggctgcgtctgaccctggcgccctggcgggcgtgacg
ggattctccctgtcgcgtcgcggagtgggcagcctgcggtggctggtgcctgtggacgtg
aggggcctcgagctggaccagatcgcacgcatcgacccaggcgaggtggccgtgtacgtt
gacaccgtcaagccgcctgttggctgtgagctcaacacgcgctgtgaggtgacgctgctc
aacgtgcacaagaagaaaggcggccagattgtgacggaccctgtgtcggtggcagccttt
gaaaagcgcctgcggcggtactgtgcagaggcggggggcgagtttgtggcctacaagccg
gacggtggcgtctggcgcttcaaggtggagcacttcagccgctacggggtgcccctggac
caggaggatgacgaggacgacgaggggcaggagggggaggagggaggaaccctgggcggc
gcagggcccgccgcggcagccaacgccggcggcagcggcgctgcaggcggcggcaagggc
cgccgctttggtgcgcctgttgtgggcggcgacagcgacctggacgaggccactgtggac
ggcgcctgcagcgacggcggggagggggatgcgcccgacagcctgatggcgggcggggat
gagggcgacgaagccgcgcttgacgagcagggggaggaggcggcgtacgaagcggccagg
ctcggagccagggaggttggcgccgacgcgggggaggtgggcgaggcggcctactacaca
ggcggcccgtcccgcaagcgcggctacggccatgccgcgcggcccccactgtccgagggc
cgggttgcatggggcaccgaggttgaggaggcggacgaggcagcggggcgcggcgagccg
ctgcagcattcgctgcctgcgctgctgtcgctgcagccaggccagcttgcggccatgcgt
gattcgttttttcgtcagggcggggccgcggcggccgatgcagctgcatccccagacgcg
ccgcagcagcagacacccgcagcgctggtggtgccggcccccagcacagcgcgtttggcg
caggtcaccgcgctcgaggccccgcttgtgccatccccgtgcgagggtatggctgtggcg
ggtggcggcggcaatgtttgcgacgccttcatgctcatggggcgatccttccgtgccggc
tttggcccggggggtgcgatggccttcccggtcaacgcctccgccacagttggcacagcc
gcccctagcgtcaccgtgacgcagctatccccgctggcggccgtcaggcccgcggcgcaa
aagcctttggaggtggatgcgcagccaggcgccgcagcgcaaaacgccgggggccgcgtc
ggcctggtgagcgcgctgcggcgccgcactctggcagcgtttgaggcccacctgtcaatg
agccgcgcggaggtggatgcaggcggcaaggacggcgaaggtggcgggggcggtgaaggt
gcagaggaagacaaggagcaggcttccggccagctggcgccgcgctggcagctggtgtgc
agcaggcggcagcttccgcggctggtgaagcagcagctggcggcgctggggcggcgcggc
gatggcgacggcgatggccagggcacctctgctgagatgtggcagctgctgcaggtgctg
tttgagcacattgagggggaagatggcgactgcgacgaggaggatggtgacgctgacgag
gacggcgacgtcgacggcggtgcaggcgccgatgccatgtccctggagggctctgagggg
gcagaggggcggccgagcgtcctggacgcaagcaccagcgcatcgcgcctggcgagctac
aagcggcgcgccacgctgtcaggatggctggcctccaaggcaggccgcgccgtgcgcgcc
gcggtggtggcagccagcgctgcgggcgggcgcgaggcgctgctgtgggcgctgctgcac
ctggtggcgggccaccagctggggcctgccgcagcactggccgcggcggcgggtgacgcg
cggcttgctgtgctgctgtctgtcgcgggacggcacggcgccatcagctcagacatcgcg
aggcagctgcaggtctggcactctgcagggttgtggcgcgatcacttcagccagccgcgc
aagctcctggttgctgtgctcagcgggcgcatgggggaggctgcggccgctttgcagctg
gactggacgcgtgccctcggcctggcgctttggtactccacaccctcaactgagggccta
ggggctgcgcttaatgcttatgaggcagcatttgcagggcctgcacgcgtcgcaggcgtg
gagccgcccgtccctgcgcacgcccgcgaccccgccgcagcgctgcccgacagcgccgcc
aacggctatgtgacggtgggcgcctccggccctgttgtcagcgacgcgcagtacgagctg
ctgctgctggccgcgcgcggtgtgaggggcgcggggcctggcttcgtggcgcggctgctg
cgcaccgccgggcgtggcaccaacccgctggacgcggctccgggctgggtgctctccagt
gtgctggcggcactgggggagctgccagacaccgacatggcgggggacccagagccagtg
ctgctgcggctcgcgctggatacggtggaacagctgctgctcttggcctctggccgggac
gccgccctggcggtctgctgggcggtgtatgttgtcgtgcacctgccgccgtcgctggcg
acggcagcggcgcgcgcggcggcggtgcagtcgctgctcgagcggactgcccctcagtgg
gcgctggatgcgcgcgcgcacaagttcctgtccggcacgcttggccttccacccgcctgg
cttgaggtagcacaggcaacctgggcaggctacctgggggaagatgccgcgcagctgcgc
cacctgcttggggcgggcgacgcgcgcgcggcgcactcgctgttctgcagtgctgtcgcg
cccagcctgttccttgaggccagcgctgtgagcgcgcgccgcctggcagccctggctgag
cagttggcagacctgcgggatattgtggggccatcctgggccgtaggcggtggtctgtac
cactcttggtccagactgtttgtgctgcagggtgaacggcaagacggggactggcggcgc
gacgtggcggccgaggcggcggctgatggcgatgcgggtgtggctgcagtgctggaggag
tgctgcctgctggcgcagcagcttgtggcggcggggcgccatctggggcgggcagtgccg
cccactcagcgcgcagtgcttgcgcggatgagtgacgatgtgggggccgcgctcgggagg
ctgagcgcccgcacctcggggcaggcttcgttcattgaggacgcggcggtggcgacgctg
cggcaggggtgtgctttgctggggcaccacgagcccacgctgatggcggggctggctgcg
cagctagctgttttatag
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