Monoraphidium neglectum: MNEG_3020
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Entry
MNEG_3020 CDS
T05028
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
mng
Monoraphidium neglectum
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mng03009
]
MNEG_3020
Enzymes [BR:
mng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MNEG_3020
Ribosome biogenesis [BR:
mng03009
]
Eukaryotic type
90S particles
Helicases
MNEG_3020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
25735898
NCBI-ProteinID:
XP_013903961
UniProt:
A0A0D2MWW9
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MDGDEIVLFKKGKRKAAVGAERNLKKISKPSAGAQPAAAPFEDVMPERALGEASTSGPAA
SSPEDADLTFKDLGVTDWLCSVLQSLGITRPTPVQRGCIPAVLDGRDVIGTAQTGSGKTA
AFALPILQRLSRDPYGVFALVLTPTRELAVQLAEQFRAFGAGMSLRECVVIGGVEQQTQA
KQLARRPHVVIATPGRLAELIDTDPGLRRGFAKARFLVLDEADRLLDPTFEEPLRSILAA
LPSDDRQTLLFSATMTQALVKLQAEKLQGAHVFQAYAGLQTADRLRQEYVFVPAKVKEVY
LYHLLEAMGDHRVRSAIVFVGTCRGAQLLALLLRELGLPCAELHSGKSQRDRLSALAAFK
SEAVPLLLATDVASRGLDIPTVDLVINYDLPVAARDYVHRVGRTARAGRAGWSLSFVTQY
DVELVHAIEGLVGQQLAPFEMPEEAVLKGITRVYAAKKRAAMDVIDLDRRRDGKGGGGRA
KSSGGSGMREGGGGGSERARAKEQGTSGGGKSKGLKIGGKSGRSEGKSSGGDGKGKSS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggacggggatgagattgtgctgttcaagaagggcaagcgcaaggctgcagtgggtgcg
gaaaggaacctgaagaagatttccaaacccagtgctggtgctcagcctgcagcggcgcct
ttcgaggacgtcatgcccgagcgggctcttggcgaggcctccacaagcgggccggcggcc
agcagccctgaagatgcggacctgacgttcaaggacttgggagtcacggactggctgtgc
agcgtgctgcagtcgctcggcatcacaaggccgacgcccgtgcagcgcggctgcattccg
gcggtgctcgacgggcgcgatgtgattggcacggcacagacaggcagcgggaagactgcg
gcgttcgcgctgcctatattgcagcggctgtcacgggacccctacggcgtgttcgcactc
gtgttgacgccgacacgggagctggcggtgcagctggcggagcagttcagggcctttggc
gctggcatgagcctgcgggagtgcgtggtcatcggcggcgtggagcagcagacgcaggcg
aagcagctggcgcggcggccgcacgtcgtcatcgccacccccggcaggctggcggagctc
atagacaccgacccggggctgcgcaggggcttcgccaaggccagatttttggtcctggac
gaggcagaccggctgctggaccccacctttgaagagccgctgcggagcatcctggcggcg
ctgccgagcgacgaccgccagacgctgctgttcagcgccacgatgacgcaggcgctggtg
aagctgcaggccgagaagcttcagggggcccacgtgttccaggcctacgccgggctgcag
accgcggacaggctgcggcaggagtatgtgtttgtgccggccaaggtcaaggaggtctac
ctgtaccacctgctggaagccatgggcgatcaccgcgtgcgcagcgccatcgtgtttgtt
ggcacctgccgcggcgcccagctgctggcgctgctgctcagggagctggggctgccctgc
gccgagctgcactcaggcaagtcccagcgcgacagactgtcggccctggccgccttcaaa
tcagaggctgtccccttgctgcttgcgaccgacgtcgccagccgcggcctcgacataccg
accgtggatctggtcatcaactacgacctgccggtggcggcgagggactatgtgcacagg
gtcggccgtaccgcgcgcgctgggcgcgccggttggtccctgtcgttcgtgacgcagtat
gacgtggagctcgtacacgccatagagggcctggtggggcagcagctggcgccctttgag
atgccggaggaggcggtgctcaagggcatcacgcgcgtctacgcggccaagaagcgcgcg
gcgatggacgtgatcgatctggaccgccggcgggacggcaagggcgggggcggcagggcc
aagagcagcggcggcagcggcatgcgggaaggcggcggcggcggcagcgagcgggcgcgc
gcgaaggagcagggcaccagcggcggcggcaagagcaagggcttgaagatcgggggaaag
agcggcaggagcgagggcaagagctcaggcggggacggcaagggcaagagcagttga
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