Monoraphidium neglectum: MNEG_4255
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Entry
MNEG_4255 CDS
T05028
Name
(RefSeq) Small RNA degrading nuclease 1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
mng
Monoraphidium neglectum
Pathway
mng03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MNEG_4255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mng03009
]
MNEG_4255
Ribosome biogenesis [BR:
mng03009
]
Eukaryotic type
Pre-60S particles
RNases
MNEG_4255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
25737133
NCBI-ProteinID:
XP_013902721
UniProt:
A0A0D2MTD8
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MAPTAVSWLKASDAAALADCVKHTQQAGLKGPGGQEWKAFVQALPAAQRHQDPSRHEKKQ
LLAFLSGVAAEPEQARQLKRYVKWRAAVQEEAAAARAGTGGAAEQQGEPAAAALSGDGRA
SSAAWRLVARTRAHPKFQRCYSFPSWEKGWIRTSRLRPDGAEAAAAPLLLGLDCEMCATS
KSSNALLSLAVVDQSGAVLLRELVKPEGKVVDLRTAITGITKDDLTGVTARRSDAAARLA
AMLGPDTILVGHSLSADLAALKLDHQPVIDTALLYSYKGLSQATPSLVHLAQQLLGRKLR
AGNSGDGDDGGDGDGRQDGGGRSSGGAASRKRQHAEGGGTPADAAAAVAAAGEGVHDSRE
DAAAAMALVAHEMAKEAAGEATAPLDPPAVKAPKSDLVKLLVHSIPASLASPQLPIIHAL
GKAGAPPPAAVEAGSGPGQLLLVFSNAAVAEAAFSALPGPRGADSVGRPQKELQLAGGFR
VRVRKMACHAGAAFGKDAPKDRGQPKTRKRKLKKRAGGGAAAEPAAAAGGGGAEGRSKRR
RKGEGEGEGMAAASAAAADGEVTPGAETGKKRRRKKGGSDAGGGGGGTVQEVQGTAQAGE
IPGGPLTHAE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaccgcggtcagctggctcaaggcgtcggacgccgccgcgcttgccgactgc
gtcaagcacacccagcaggcgggcctgaaaggtccaggcgggcaggagtggaaggctttc
gtgcaggccctgccggcggcgcagcgtcaccaggacccgtctcgccacgagaagaagcag
ctgctggccttcctatcgggcgtggccgccgagcctgagcaggcccggcagcttaagaga
tacgtcaagtggcgcgcagcggtgcaggaggaggcagcggccgcgcgcgcgggtaccggc
ggagccgcggagcagcagggcgagcccgccgccgcagcattgagcggcgacgggcgcgcg
agcagcgccgcgtggcggctggtggcgcgcacgcgggcgcaccccaagttccagcgctgc
tacagctttccttcatgggagaagggttggataaggaccagcaggctgcggcccgatggg
gccgaggcggcagctgccccgctgctgctggggctggattgtgaaatgtgcgccaccagc
aaaagcagcaacgcgcttctgtccctggcggtggtggaccagtctggcgcggtcctgttg
agggagctggtcaaacccgagggcaaggttgttgacctgcgcaccgccatcacgggcatc
acaaaggacgacctgacgggggtcaccgcgcgacgcagcgacgccgcggcgcggctggcg
gcgatgctggggccggacaccatcctggtggggcactcgctcagcgctgacctggcggct
ctcaagcttgaccaccagccggtcatcgacactgcccttctctactcctataagggcctg
tctcaggcgacgccttcgctagtccacctggcgcagcagctgctcggccggaagctgcgt
gccggcaacagcggcgacggcgacgacggcggcgacggcgatggccggcaagacggcggc
ggcaggagcagcggcggggccgcatcgcgcaagcggcagcatgcggaaggcggagggacg
ccggcggatgcggcggcggcggtagctgctgcgggtgagggcgtgcacgacagcagggag
gatgcggcggcggcgatggcgctggtggctcacgagatggccaaagaagcggcgggggag
gccacggcgccgctggatcctccggctgtcaaggccccaaagagtgacctggtgaagctg
cttgtccactcgattccagcctccctagcttccccccagcttcccatcatccacgccctc
ggcaaggccggcgcgccgccgcccgcggcggtcgaggcggggtcggggccggggcagctg
ctgctggtgttttcgaacgcggcggtggcggaagcggcgttcagcgcgctgccggggccg
cggggggcggacagcgtggggcggccgcagaaggagctgcagctggctgggggcttcagg
gtccgtgtgcgcaagatggcgtgccacgcgggggcggcctttggcaaggacgccccgaag
gacagagggcagccgaagacgcgaaagcgcaagcttaaaaagagggctggcggcggggct
gccgcggagcctgcggctgcggcagggggcggcggcgcagagggcaggtcgaagcggcgg
cggaagggcgagggcgagggcgagggtatggcagcggcgtcggcggcggcggcggatggg
gaggtgacgccgggcgccgagaccggaaagaagcggcggcggaagaagggcgggagcgat
gctggcggcggcggcggcggcacggtgcaggaggtgcagggcacagcccaggcaggagag
attcctggcggacccctgactcatgccgagtag
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