KEGG   Monoraphidium neglectum: MNEG_4777
Entry
MNEG_4777         CDS       T05028                                 
Name
(RefSeq) Replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
mng  Monoraphidium neglectum
Pathway
mng03030  DNA replication
mng03410  Base excision repair
mng03420  Nucleotide excision repair
mng03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mng00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MNEG_4777
   03410 Base excision repair
    MNEG_4777
   03420 Nucleotide excision repair
    MNEG_4777
   03430 Mismatch repair
    MNEG_4777
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mng03032]
    MNEG_4777
   03036 Chromosome and associated proteins [BR:mng03036]
    MNEG_4777
   03400 DNA repair and recombination proteins [BR:mng03400]
    MNEG_4777
DNA replication proteins [BR:mng03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    MNEG_4777
  DNA Replication Termination Factors
   ELG1-RFC complex
    MNEG_4777
Chromosome and associated proteins [BR:mng03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    MNEG_4777
DNA repair and recombination proteins [BR:mng03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     MNEG_4777
  Check point factors
   HRAD17(Rad24)-RFC complex
    MNEG_4777
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid RuvB_N AAA Mg_chelatase AAA_16 AAA_22 AAA_5 AAA_11 Sigma54_activ_2 DUF815 Rad17 Resolvase DNA_pol3_delta2 ABC_tran RsgA_GTPase AAA_29 nSTAND3
Other DBs
NCBI-GeneID: 25737654
NCBI-ProteinID: XP_013902203
UniProt: A0A0D2L8P6
LinkDB
Position
Unknown
AA seq 357 aa
MALWADKYQPKALDKFVLNKGISDNLKKLVATGDCPHTLFYGPPGAGKRTLVMALLREIY
GPGAEKIRVETKPWVLELPSRKLELELTTVSSNYHVELSPGDVGGTNDRYVVQEVIKDLA
KNRPLDVATGHKGFKVLVLNEVDRLSREAQQSLRRTMEKYSAGCRLVMDPVRSRCLCVRV
AAPSNDVVQEQLFAVAKKEGLQLPAPLAARIAASSLRDLRRALLTLEVCRVQQYPFREDQ
AVAPADWEAYVAEVAGDILQEQSAKRLYQARCSLLGHQVRGKLYELLANCIPPELLLRAL
LLELLKKLDDEIKPDVAALAAQYEHRLQEGQKAIFHLEAFVAQFMSRYKNWQLTAFG
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggcgctgtgggctgacaagtaccagcccaaggcgctggacaaatttgtcctgaacaag
ggcatatcagacaacctgaagaagctggtggcgacgggggactgcccacatacattgttc
tatggcccacctggtgccggcaagcgcacactggtgatggcgctgctgcgggagatctac
ggtccgggggcggagaagatccgcgtggaaaccaagccctgggtgctggagctgcccagc
cgcaagctggagctggagctcaccacggtcagcagcaactaccacgtggagctgtcaccg
ggtgacgtggggggcaccaacgaccgctacgtggtgcaggaggtcataaaggacctcgcc
aagaaccggcccctggatgtggccacgggccacaagggcttcaaggtgctggtgctgaac
gaggtggaccgcctcagccgcgaggcccagcagtctttgcgccgcacaatggagaagtac
agcgcgggctgccgcctcgtgatggaccctgttcgcagccgctgcctgtgcgtgcgcgtg
gcggcgccctccaacgacgtcgtgcaggagcagctgtttgcagtggccaagaaagagggg
ctgcagctgcccgcgccgctggccgcgcgcattgcggcgagcagcctgcgggacctgcga
cgagcgctgctcacactcgaggtgtgccgcgtacagcagtaccccttccgcgaggaccag
gcagtggcgccggcagactgggaggcgtacgtcgcggaggtggcgggcgacatcctgcag
gagcagagcgccaagaggctctaccaggcgcgctgcagcctgctgggccatcaagttcgt
ggcaagctgtacgagctgctggccaactgcatccccccagagctgctgctgcgagcgctg
ctgctggagctgctcaagaagctggacgacgagatcaagcctgacgtggcggcgctggca
gctcagtacgagcaccggctgcaggagggccagaaggccatcttccacctggaggccttc
gtggcgcagttcatgtcgcggtacaaaaactggcagctgacagccttcggctga

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