Monoraphidium neglectum: MNEG_5777
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Entry
MNEG_5777 CDS
T05028
Name
(RefSeq) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mng
Monoraphidium neglectum
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mng03016
]
MNEG_5777
Enzymes [BR:
mng01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
MNEG_5777
Transfer RNA biogenesis [BR:
mng03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
MNEG_5777
Prokaryotic type
MNEG_5777
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
TFIIA
DNApol_Exo
DUF4834
Motif
Other DBs
NCBI-GeneID:
25738654
NCBI-ProteinID:
XP_013901201
UniProt:
A0A0D2MNW3
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MLEHRVRPGLQLKAAFVTSLQSTALGGLGGLLLRLKQDGHGRLGLVGPPGTEACLEALRS
FIRWQHPAVAVAEAAGGGPSVTAPPDAAQAAAAAAAAGAAAPQVYEDAWLQACAIGASSA
GWEAPAWLAAAADGEARERPTATAALAGEIDGGDQGGPSRPEGVGESESESESDSKNLGA
KRAKASADFADLDAIFLASARGGRSSGGGGRIGAIVEGQLLLQLAGPACDEVTLPSSALT
LDACEVQRALLDERPELEAALQRLHARRPALLGQAEQLAASVEADRDSELQPPPPALAWP
SARGSGVVLLGTGSAEPSKYRGPSGILLRVCNSGMGRQQRQQQLQQQQQQQQQQQQQQQQ
HSQLRSDDAGWMLLDCGEGTWGQVVRLLGASAAAQLAASLACVWVSHRHADHMLGLPAVL
SARPASGPPLLVVGPAEARDWLAALAPHHVAWRYEFLPLQHFSGAAVAGAGAVAGAAAVM
GGRLGFSGWTSVAVDHCHGAFGLVLEHSQGWKLVYSGDTRPCERLARAGAGATLLIHEAT
FEPGLEAHALRKRHSTSAEAIDAGRRMGAYRTLLTHFSQRYPKLPAGLDAAAARWRERPL
LGFDGMVVPLALLPQLPALTPLVAAALGETGPEGRVGGDEAGPLAVKS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgctggagcacagggtccggccaggcctgcagctcaaggcggcgtttgtcaccagcctg
cagagcacggcgctgggcggcctgggcggcctgctgctgcgcctgaagcaggacggccac
ggccggctgggcctggtggggccgcccgggaccgaggcctgcctggaggccctcaggagc
ttcatacgttggcagcaccccgcggtggctgtggcagaggcggcaggcggcggcccttct
gtcacagcacccccagacgcagcgcaggcggcggcggcggcggcggcggcgggggcggcg
gcgccacaggtgtatgaggacgcgtggctgcaggcctgcgccatcggcgcctcctcggcc
ggctgggaggcgcccgcctggctggcagcagccgcggacggagaggctagggagcggcca
accgccacggccgccctggcaggggaaattgacggtggcgatcagggcggcccgagcaga
cccgagggggtgggcgagagcgagagcgaaagcgagagcgatagcaaaaatctgggcgcc
aagcgcgccaaggccagcgccgattttgctgacctggacgccatcttccttgcgtctgcg
cgcggcgggcgctccagcggcggcggcgggcgcattggggcgatcgtagaagggcagctg
ctgctccagctggccgggccggcgtgcgatgaggtcacgctgccgtcatcggcgctgacg
ctcgacgcgtgcgaggtccagagggcgctgctggacgagcggcccgagctggaggccgcg
ctgcagcgtctgcatgcgcggcgcccagcgctgctggggcaggctgagcagctggcggcc
agcgtggaggcggaccgggattcggagctgcagccgccacccccggcgctggcgtggccg
tcggcgcgcgggagcggagtcgtgctgctgggcacgggctcggcggagccatccaagtat
cgcgggccaagcggcatcctgctgcgggtgtgcaactctggcatggggcgacagcagcgg
cagcagcaactgcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
cacagccagctcaggagtgatgacgcgggctggatgctgctggattgcggcgagggcacg
tggggccaggtggtgcggctgctaggggcgtctgctgccgcccagctggcggcctccctg
gcatgcgtctgggtgtcccaccgccatgcagaccacatgctgggcctgcccgcggtcctg
tccgcgcggcccgcctcgggcccgcccctactggtggtcggccccgccgaggcgcgcgac
tggctggccgcgctcgcgccccatcacgtcgcgtggcggtacgagttcctgccgctgcag
cacttcagcggcgccgccgtcgcgggggcgggggcggtggcgggggcggcggcggtgatg
ggcgggcggctggggttcagcgggtggacctctgtcgcggtggaccactgccacggcgcg
tttgggctggtgctggagcactctcagggctggaagctggtgtactctggcgacactcgc
ccctgtgagcgcctcgcgcgggccggtgccggcgccaccctgctgatacacgaggccacc
ttcgagccaggcctggaggctcacgcgctgcggaagcgccacagcaccagcgccgaagcc
attgatgcggggcggcgcatgggcgcgtaccggacgctgctgacccacttcagccagaga
tacccgaagctgcccgccggcctggacgcggccgcggcgcggtggcgggagcgcccgctg
ctcggctttgacgggatggtggtgcctctggcgctgctgccacagctgccagctctgacg
ccgctggtggcagcggcgctcggggagacgggccctgagggcagggttggcggcgacgag
gcggggccgcttgcagtgaaatcctga
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