Monoraphidium neglectum: MNEG_5930
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Entry
MNEG_5930 CDS
T05028
Name
(RefSeq) ATP-dependent RNA helicase DDX6/DHH1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
mng
Monoraphidium neglectum
Pathway
mng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MNEG_5930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mng03019
]
MNEG_5930
03036 Chromosome and associated proteins [BR:
mng03036
]
MNEG_5930
Enzymes [BR:
mng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MNEG_5930
Messenger RNA biogenesis [BR:
mng03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
MNEG_5930
mRNA degradation factors
5'-3' decay
Decapping complex
MNEG_5930
Chromosome and associated proteins [BR:
mng03036
]
Eukaryotic type
Gene silencing
piRNA pathway
MNEG_5930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
DS
CMS1
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
25738807
NCBI-ProteinID:
XP_013901052
UniProt:
A0A0D2JSR5
LinkDB
All DBs
Position
Unknown
AA seq
256 aa
AA seq
DB search
MAALQHGGRLDVTATKGHEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGRDILA
RAKNGTGKTAAFSIPVLEKIDPTKNEVQAMLLVPTRELALQTAQVCKELGKHLAVDIMVT
TGGTSLKDDIMRLYQPVHVVVATPGRILDLASKGVCKLNNCRVLVMDEADKLLSPEFQPL
IEQLISFLPDGRQIMLFSATFPVTVKQFKEKFLRKPYIINLMDELTLKGVTQYYAFVEER
QKVHCLNTLFSKCVCV
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacttcagcatggtggtaggctggatgtgactgccaccaagggccatgagttc
gaagactacttcttgaagcgcgagctgctcatggggatctacgagaagggcttcgagaag
ccgtcccccatccaagaggagtccatccccatcgcgctgaccgggcgcgacatcctcgcg
cgcgccaaaaacggcaccggcaagaccgccgccttctccatccccgtcctcgaaaagatc
gaccccactaagaacgaggtccaagccatgctgctggttcccacgcgcgagctggcgctg
cagacggcccaggtgtgcaaggagctgggcaagcacctggcggttgacataatggtgact
acgggcggcaccagcctcaaggatgacatcatgcggctgtaccagcccgtgcacgtggtg
gtggccacccccggccgcatcctggacctggccagcaagggcgtctgcaagctcaacaac
tgccgcgtcctggtcatggacgaggccgacaagctgctgtcccccgagttccagccgctg
atcgagcagctgatctccttcctgcccgacggccgccaaatcatgctgttcagcgcgacc
ttcccggtcacggtcaagcagttcaaggagaagttcctgcgcaagccctacatcatcaac
ctgatggacgagctgacgctcaagggcgtgacgcagtactacgcgtttgtggaggagagg
cagaaggtgcactgcctcaacacgctcttctccaagtgtgtgtgcgtgtga
DBGET
integrated database retrieval system
