Monoraphidium neglectum: MNEG_6507
Help
Entry
MNEG_6507 CDS
T05028
Name
(RefSeq) Exosome complex exonuclease RRP43
KO
K12586
exosome complex component RRP43
Organism
mng
Monoraphidium neglectum
Pathway
mng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MNEG_6507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mng03019
]
MNEG_6507
Messenger RNA biogenesis [BR:
mng03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MNEG_6507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
25739383
NCBI-ProteinID:
XP_013900471
UniProt:
A0A0D2MLK1
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MAATLPPAAAAAAPAAQHQHPHHNDHEQHQQLQADAFKRLYPEQFFARFAAEGVRPDGRG
LSTPRPVTIGLGAVGAADGSALVKVGPTAVLAGCRLEVAVPPDDAPGVGQVVVSAELSAL
ASGAWRPGRAAPEAHELAARVSQLLTGPSGVLDARQLCISPGAAVWVLYLDLYVLDAAGG
LLDAALLAAAAALRDCRLPSVHLTDEGNVERGPDPEASADGGAGGGGGGGGGDSTALRLA
AAPVCLTCGVYKGAVVVDPDHEEEALMGARVSVVVDGEGGLLGVFKPGGSALVAPQTLLT
CVALAQARQREVQAQLEAALRQQREQQRPEGG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacgctgccgcccgcagccgcagcggccgcgcctgcagcgcagcatcagcat
ccgcaccacaatgaccacgagcagcaccagcagctgcaggctgacgcgttcaagcgcctc
taccctgagcagttcttcgcgcgctttgctgccgagggcgtccgccccgacggccgcggc
ctctcgacgccgcgccccgtcacaatcggcctcggcgctgtcggcgcagccgacggctcg
gctctcgtgaaggtcggccccaccgctgtcctcgccggctgccgcctcgaagtcgccgtg
ccgcccgacgacgccccaggggttggccaggtcgtcgtgtccgcagagctctccgccctc
gccagcggcgcgtggcgccccggccgcgccgcgcccgaggcgcacgagctcgcggcgcgc
gtctcgcagctgctgaccgggccgtcgggcgtcctggacgcgagacagctctgcatctcg
cccggcgcggcggtgtgggtgctgtatttggacctatacgtgctggacgccgccggcggc
ctgcttgatgccgcgctgctcgccgcggccgcggcgctgcgcgactgccgcctgccctcc
gtgcacctaacagacgagggcaacgtcgagcgcggccccgacccggaagcttccgccgac
ggcggcgctggcggcggcggcggcggcggcggcggcgacagcacggcgctgcggctggcg
gcggcgccggtgtgcttgacgtgcggcgtatacaagggggccgtggtggtggacccggac
cacgaggaggaggcgctgatgggggcgcgcgtcagcgtggtggtggacggggagggcggg
ctgctaggcgtgttcaagcctggcggctcagcgctggtcgcgccccagacgctgctgacg
tgcgtcgcgctggcgcaggcgcggcagagggaggtgcaggcgcagctcgaggcggcgctg
cggcagcagcgggagcagcagcggccagagggagggtga
DBGET
integrated database retrieval system
