KEGG   Monoraphidium neglectum: MNEG_6548
Entry
MNEG_6548         CDS       T05028                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
mng  Monoraphidium neglectum
Pathway
mng03082  ATP-dependent chromatin remodeling
mng03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mng00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    MNEG_6548
   03083 Polycomb repressive complex
    MNEG_6548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mng03036]
    MNEG_6548
Chromosome and associated proteins [BR:mng03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     MNEG_6548
  Histone modification proteins
   HAT complexes
    HATB complex
     MNEG_6548
   HDAC complexes
    Sin3A-HDAC complex
     MNEG_6548
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     MNEG_6548
    PRC2.2
     MNEG_6548
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     MNEG_6548
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    MNEG_6548
  Chromatin remodeling factors
   NuRD complex
    MNEG_6548
   NuRF complex
    MNEG_6548
   NuRF complex (fruit fly)
    MNEG_6548
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I WD_LRWD1 eIF2A Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_1st VID27_N
Other DBs
NCBI-GeneID: 25739424
NCBI-ProteinID: XP_013900431
UniProt: A0A0D2MLF9
LinkDB
Position
Unknown
AA seq 413 aa
MGNGDDEYPDEVEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPGEKEVVPGQ
DYSKQKLILGTHTSDNEQNYLMLAEVQLPLQDSEVDARGYDDERGEVGGFGSAHGKVNIV
QQINHDGEVNRARAMPQDKFKIATKTVSAEVWVFDWAKHPSKPPSDGACNPDLRLLGHRT
EGYGLAWSPFHRGHLLSGSDDAQICIWDINANTRGNRQVDAKVIYSEHSGVIEDVAWHQH
HADIFGSVGDDKQLVLWDTRKPPKDGVMVAAEAHSAEVNCIAFNPHNPHVLATGSADKTV
ALHDWRNLSQRLHVFESHSEEVFQIGWSPKHETILSSCGADRRVMIWDLSRIGDEQSEED
AQDGPPELLFIHGGHTSKISDFSWSPNDDWVVASVAEDNILQVWQMAENLIDA
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggggaacggggacgatgagtaccccgacgaggtcgaggagcggctcatcaacgaggag
tacaagatctggaagaagaacacgccgttcctgtatgacctggtcatcacccacgcgctg
gagtggccgagcttgacggtgcaatggctgccgggggagaaggaggtggtgccaggccag
gactactccaagcagaagctgatcctggggacccacaccagcgacaacgagcagaactac
ctcatgctggctgaggtccagctgccgctgcaggactcggaagtggacgcgcgcggctat
gacgacgagcgcggggaggtcgggggcttcggcagcgcgcacggcaaggtcaacattgtg
cagcagatcaaccacgacggcgaggtcaaccgcgccagggccatgccccaggacaagttc
aagatcgccaccaaaacagtgtcggctgaggtgtgggtgtttgactgggccaagcacccg
tccaagccgccgtcggacggcgcgtgcaacccggacctgcggctgctcgggcaccgcacg
gagggctacggcctcgcgtggagccccttccacaggggccacctgctcagcggcagcgac
gacgcccagatctgcatctgggacatcaacgccaacacgcgcggcaaccggcaagtggac
gccaaggtcatctactctgagcactctggcgtgatcgaggacgtggcgtggcaccagcac
cacgcggacatcttcggcagcgtcggcgacgacaagcagctcgtgctgtgggacactcgg
aagccccccaaggacggcgtgatggtcgccgcggaggcgcactctgcggaggtcaattgc
atcgcgttcaacccccacaacccccacgtgctggccacgggctcggccgacaagaccgtg
gcgctccacgactggcgcaacctcagccagcggctgcacgtgttcgagtcgcactctgag
gaggtcttccagattgggtggagccccaagcacgagaccattctgtcgtcgtgcggcgcg
gaccggcgggtcatgatctgggacctctcgcgcataggggacgagcagtccgaggaggac
gcgcaggatgggccccctgagctgctgttcatccacggcggccacacctcgaagatcagc
gacttcagctggagccccaacgacgactgggtggtggcctctgtggcagaggacaacatt
ctgcaggtgtggcagatggccgagaacttgattgacgcgtga

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