KEGG   Monoraphidium neglectum: MNEG_7931
Entry
MNEG_7931         CDS       T05028                                 
Name
(RefSeq) hypothetical protein
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
mng  Monoraphidium neglectum
Pathway
mng03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mng00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MNEG_7931
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mng03019]
    MNEG_7931
Messenger RNA biogenesis [BR:mng03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MNEG_7931
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     MNEG_7931
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 25740807
NCBI-ProteinID: XP_013899048
UniProt: A0A0D2KXN2
LinkDB
Position
Unknown
AA seq 828 aa
MQLPNEELGGALEDGLEAPPEEHPIGGFEEDDLPIEQMVGDGDDEDEDEDLSLAALFARK
LAAGDVAPGNRQQQQQQQQHLAPASGPAPPPVPSLLSAMRSAASGGLAAPAASLPPASQP
FSIGLDLHLGGLPDGKPIGASASAAAALGPQAPSLWPSQQPAPTAAVGPTAPGGTPQPAV
RAPGAGAMVAGAMSAEQLEAEMISRAREQQQKQAAAAADKGGGLLALLKGGAAAASLASP
GPQPEQQQQQQQQQRGMPPHGVPGMGMPPNPFPPGSLPPGAVPPGFPYGQLAPHFKGPYG
PGPMPGGRPPMMGPGGPMPPNMGPPAGPGQLPPGFNLPPGFPMPPLGPQQYEGQLMSNGE
IEHVLRIQFAATHTGDPYVEDYYAQAYRHKYLGGRNAATFAPDALRRDAASGLALRESRH
AAVEGLGRFVLSNIRTPKRLMDVSGRAAGKENGAAGGDGKGDGGEQPAAAAAAARLEDEP
MLAARILIEDCNANLMRVEDLDRAAAADEAAGLVLDASSAAGAALRRERAALLCGVVASL
QLARAPGDGGGDWVFGRVMALPKGRLMLAKALRFMVHPATGRPAPQGAGPRGGGGARQQQ
QQQQQRRQQVPWNSEAGGEAGAEAAGAEAAAPALWAVLRNARELFGPAVAAGAGARAEGE
KRMLAATEALAAAAAEALRRCGAARDPAWLGSVLSALLLRATELGLGPDGPAPDEDGADG
GGAPAPAADGAAADEWRAAYAEIEAAVSRHLAALQQAKAAAGAESNGGGAGGAAAAAAAS
GMPAATLEALRAHAAELAAVPLVRGMVSDHARGEGRERLRLLLLEVAR
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgcagctcccaaatgaggagctgggcggcgctttggaggacggcctcgaggcgccgcca
gaggagcaccccattggcgggtttgaagaggacgacctcccgattgagcagatggtcggc
gacggcgacgacgaggacgaggacgaggacttgtcgctcgccgcgctgttcgcacgcaag
ctcgcggccggcgacgtcgccccaggcaaccggcagcagcagcagcagcagcagcagcac
ctggcgcccgcgagcggccccgcgccgccgccggtgccgtcgctgctgtccgccatgcgg
tccgccgcgtccggtgggctggctgcgccagcggcgtcgctcccgccggcgagccagcct
ttctcgatcggcctagacctccatctgggaggcctgccagacggcaagccaataggcgcc
tccgcgtcggccgccgccgccctggggccccaggcgccctccctctggccctcccagcaa
ccagcacccaccgcggccgtcgggcccacggcgccaggcgggacgccacagccggccgtc
cgggcgccgggtgcgggggcaatggtggcgggtgccatgtctgctgagcaactggaggcc
gaaatgattagccgggcgcgggagcagcagcagaagcaggcggcggcggctgcggacaag
ggcggtggcttgctagcgctgctcaaggggggcgcagctgcggcgtccctggcgtctccc
gggccacagccagagcagcagcagcagcagcagcagcagcaacgcggcatgccgccgcat
ggggtgcctgggatggggatgccccccaaccccttcccgcccggcagtcttccgccaggc
gcggtgccgccgggcttcccgtacgggcagctggcgccccacttcaaggggccgtacggg
ccaggcccgatgcctggcgggcgcccgcccatgatgggtcctgggggcccgatgccgccc
aacatgggcccgcccgcagggcccgggcagctgccgcccggcttcaacctcccgccaggc
ttcccgatgccgccattgggcccgcagcagtacgaggggcaactgatgagcaacggggag
attgagcacgtgttgcgcatccagtttgccgcgacgcacacgggggacccctatgtggag
gattactacgcgcaggcgtaccgccacaagtatctgggcggccgcaacgccgcgacgttt
gcgcccgacgcgctccgccgcgacgccgcctccggcctcgcgctccgcgagtcgcgccac
gcggccgtcgagggcctgggccgcttcgtgctgtcaaacatcaggaccccaaagcggctg
atggacgtctctggccgcgcggcaggcaaggagaacggcgccgcgggcggggacgggaaa
ggggacggcggcgagcagccggccgcggccgcggcggccgcgcggcttgaggacgagccg
atgctcgcggcgcggattctaatcgaggactgcaacgcgaatctgatgcgtgtggaggac
ctggaccgcgcggcggcggccgacgaggcggccggcctggtgctcgacgcgtcgtccgcc
gcgggcgccgcgctgcgccgcgagcgcgccgcgctgctttgcggcgtcgttgcgtcgctg
cagctcgcgcgcgcgcccggggacggcgggggagactgggtgtttgggcgagtcatggcg
ctgcccaaggggcggctcatgctcgcgaaggcgctgcgcttcatggtgcacccggccacg
ggccgcccggcgccgcagggcgccggtccgcgcggtggcggcggcgcgcggcagcagcag
cagcagcagcagcagcggaggcagcaggtcccctggaactcagaggccgggggcgaggcg
ggcgccgaggctgccggcgcggaggcggcggcgccggcgctgtgggccgtgctgcgcaac
gcccgggagctgttcggccccgctgttgcggccggcgccggcgcgcgcgccgagggcgag
aagcgcatgctcgcggcgaccgaggcgctcgcggcggcggcggcggaggcgctgcggcgc
tgcggcgccgcgcgggaccccgcgtggctcgggtccgttctctccgccctgctgctgcgc
gcgacagagctggggcttgggcccgacggcccggcgccggacgaggacggggccgacggc
ggcggcgcgccggcgccggcggcggacggcgcggcggccgatgagtggcgggccgcgtac
gcggagattgaggcggcggtgtcgcgccacctggcggccctccaacaggccaaggccgcc
gccggcgccgaaagcaacggcggcggcgcaggcggcgccgcggccgcggccgccgcgtcg
ggcatgcccgcggcgacgctggaggcgctgcgggcgcacgccgcggagctggcggcggtc
ccgctggtgcggggcatggtgtcggatcacgcgcgcggggaggggcgcgagcggctgcgg
ctgctgctgctggaggtcgcgcggtga

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