Monoraphidium neglectum: MNEG_7931
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Entry
MNEG_7931 CDS
T05028
Name
(RefSeq) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
mng
Monoraphidium neglectum
Pathway
mng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MNEG_7931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mng03019
]
MNEG_7931
Messenger RNA biogenesis [BR:
mng03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MNEG_7931
mRNA degradation factors
5'-3' decay
Decapping complex
MNEG_7931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
25740807
NCBI-ProteinID:
XP_013899048
UniProt:
A0A0D2KXN2
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
MQLPNEELGGALEDGLEAPPEEHPIGGFEEDDLPIEQMVGDGDDEDEDEDLSLAALFARK
LAAGDVAPGNRQQQQQQQQHLAPASGPAPPPVPSLLSAMRSAASGGLAAPAASLPPASQP
FSIGLDLHLGGLPDGKPIGASASAAAALGPQAPSLWPSQQPAPTAAVGPTAPGGTPQPAV
RAPGAGAMVAGAMSAEQLEAEMISRAREQQQKQAAAAADKGGGLLALLKGGAAAASLASP
GPQPEQQQQQQQQQRGMPPHGVPGMGMPPNPFPPGSLPPGAVPPGFPYGQLAPHFKGPYG
PGPMPGGRPPMMGPGGPMPPNMGPPAGPGQLPPGFNLPPGFPMPPLGPQQYEGQLMSNGE
IEHVLRIQFAATHTGDPYVEDYYAQAYRHKYLGGRNAATFAPDALRRDAASGLALRESRH
AAVEGLGRFVLSNIRTPKRLMDVSGRAAGKENGAAGGDGKGDGGEQPAAAAAAARLEDEP
MLAARILIEDCNANLMRVEDLDRAAAADEAAGLVLDASSAAGAALRRERAALLCGVVASL
QLARAPGDGGGDWVFGRVMALPKGRLMLAKALRFMVHPATGRPAPQGAGPRGGGGARQQQ
QQQQQRRQQVPWNSEAGGEAGAEAAGAEAAAPALWAVLRNARELFGPAVAAGAGARAEGE
KRMLAATEALAAAAAEALRRCGAARDPAWLGSVLSALLLRATELGLGPDGPAPDEDGADG
GGAPAPAADGAAADEWRAAYAEIEAAVSRHLAALQQAKAAAGAESNGGGAGGAAAAAAAS
GMPAATLEALRAHAAELAAVPLVRGMVSDHARGEGRERLRLLLLEVAR
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcccaaatgaggagctgggcggcgctttggaggacggcctcgaggcgccgcca
gaggagcaccccattggcgggtttgaagaggacgacctcccgattgagcagatggtcggc
gacggcgacgacgaggacgaggacgaggacttgtcgctcgccgcgctgttcgcacgcaag
ctcgcggccggcgacgtcgccccaggcaaccggcagcagcagcagcagcagcagcagcac
ctggcgcccgcgagcggccccgcgccgccgccggtgccgtcgctgctgtccgccatgcgg
tccgccgcgtccggtgggctggctgcgccagcggcgtcgctcccgccggcgagccagcct
ttctcgatcggcctagacctccatctgggaggcctgccagacggcaagccaataggcgcc
tccgcgtcggccgccgccgccctggggccccaggcgccctccctctggccctcccagcaa
ccagcacccaccgcggccgtcgggcccacggcgccaggcgggacgccacagccggccgtc
cgggcgccgggtgcgggggcaatggtggcgggtgccatgtctgctgagcaactggaggcc
gaaatgattagccgggcgcgggagcagcagcagaagcaggcggcggcggctgcggacaag
ggcggtggcttgctagcgctgctcaaggggggcgcagctgcggcgtccctggcgtctccc
gggccacagccagagcagcagcagcagcagcagcagcagcaacgcggcatgccgccgcat
ggggtgcctgggatggggatgccccccaaccccttcccgcccggcagtcttccgccaggc
gcggtgccgccgggcttcccgtacgggcagctggcgccccacttcaaggggccgtacggg
ccaggcccgatgcctggcgggcgcccgcccatgatgggtcctgggggcccgatgccgccc
aacatgggcccgcccgcagggcccgggcagctgccgcccggcttcaacctcccgccaggc
ttcccgatgccgccattgggcccgcagcagtacgaggggcaactgatgagcaacggggag
attgagcacgtgttgcgcatccagtttgccgcgacgcacacgggggacccctatgtggag
gattactacgcgcaggcgtaccgccacaagtatctgggcggccgcaacgccgcgacgttt
gcgcccgacgcgctccgccgcgacgccgcctccggcctcgcgctccgcgagtcgcgccac
gcggccgtcgagggcctgggccgcttcgtgctgtcaaacatcaggaccccaaagcggctg
atggacgtctctggccgcgcggcaggcaaggagaacggcgccgcgggcggggacgggaaa
ggggacggcggcgagcagccggccgcggccgcggcggccgcgcggcttgaggacgagccg
atgctcgcggcgcggattctaatcgaggactgcaacgcgaatctgatgcgtgtggaggac
ctggaccgcgcggcggcggccgacgaggcggccggcctggtgctcgacgcgtcgtccgcc
gcgggcgccgcgctgcgccgcgagcgcgccgcgctgctttgcggcgtcgttgcgtcgctg
cagctcgcgcgcgcgcccggggacggcgggggagactgggtgtttgggcgagtcatggcg
ctgcccaaggggcggctcatgctcgcgaaggcgctgcgcttcatggtgcacccggccacg
ggccgcccggcgccgcagggcgccggtccgcgcggtggcggcggcgcgcggcagcagcag
cagcagcagcagcagcggaggcagcaggtcccctggaactcagaggccgggggcgaggcg
ggcgccgaggctgccggcgcggaggcggcggcgccggcgctgtgggccgtgctgcgcaac
gcccgggagctgttcggccccgctgttgcggccggcgccggcgcgcgcgccgagggcgag
aagcgcatgctcgcggcgaccgaggcgctcgcggcggcggcggcggaggcgctgcggcgc
tgcggcgccgcgcgggaccccgcgtggctcgggtccgttctctccgccctgctgctgcgc
gcgacagagctggggcttgggcccgacggcccggcgccggacgaggacggggccgacggc
ggcggcgcgccggcgccggcggcggacggcgcggcggccgatgagtggcgggccgcgtac
gcggagattgaggcggcggtgtcgcgccacctggcggccctccaacaggccaaggccgcc
gccggcgccgaaagcaacggcggcggcgcaggcggcgccgcggccgcggccgccgcgtcg
ggcatgcccgcggcgacgctggaggcgctgcgggcgcacgccgcggagctggcggcggtc
ccgctggtgcggggcatggtgtcggatcacgcgcgcggggaggggcgcgagcggctgcgg
ctgctgctgctggaggtcgcgcggtga
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