KEGG   Monoraphidium neglectum: MNEG_8127
Entry
MNEG_8127         CDS       T05028                                 
Name
(RefSeq) replication factor C subunit 2/4
  KO
K10755  replication factor C subunit 2/4
Organism
mng  Monoraphidium neglectum
Pathway
mng03030  DNA replication
mng03410  Base excision repair
mng03420  Nucleotide excision repair
mng03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mng00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MNEG_8127
   03410 Base excision repair
    MNEG_8127
   03420 Nucleotide excision repair
    MNEG_8127
   03430 Mismatch repair
    MNEG_8127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mng03032]
    MNEG_8127
   03036 Chromosome and associated proteins [BR:mng03036]
    MNEG_8127
   03400 DNA repair and recombination proteins [BR:mng03400]
    MNEG_8127
DNA replication proteins [BR:mng03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    MNEG_8127
  DNA Replication Termination Factors
   ELG1-RFC complex
    MNEG_8127
Chromosome and associated proteins [BR:mng03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    MNEG_8127
DNA repair and recombination proteins [BR:mng03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     MNEG_8127
  Check point factors
   HRAD17(Rad24)-RFC complex
    MNEG_8127
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 RCF1-5-like_lid AAA_lid_RFC1 AAA_22 AAA_14 AAA_11 DNAX_ATPase_lid AAA_assoc_2 Viral_helicase1 nSTAND_NTPase5 Beta-prop_NWD2_C AAA_30 AAA_25 AAA_28 APOBEC4_like AAA_24 ABC_tran nSTAND3 ERICH1_C
Other DBs
NCBI-GeneID: 25741003
NCBI-ProteinID: XP_013898853
UniProt: A0A0D2KX20
LinkDB
Position
Unknown
AA seq 250 aa
MDVDKPAKQEGSHSRNYDLPWGPPGTGKTTSILALSHQLLGPNFKEAVLELNASDDRGID
VVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTGGAQQALRRTMEIYSNTTRFALACNTS
SKVIEPIQSRCAIVRFTRVSDVQVLARLKQVVEKEGVTCTPDGLEAVVFTADGDMRQALN
NLQATHTGFGDITQDNVFRVCDQPHPTLIRLVLQCCVAGRLEEAYTHMKALCDQGYSAMD
IITTLFRPGL
NT seq 753 nt   +upstreamnt  +downstreamnt
atggacgtggacaagcccgcgaagcaggagggatcacattctaggaattatgacctacca
tgggggccccctggcactggcaagacgacgtccatcctggcgctgtcccaccagctgctg
gggccgaacttcaaggaggcggtgctggagctcaacgcctcggacgacaggggcatcgac
gtggtgcgcaacaaaatcaagatgtttgcgcagaagaaggtcaccctgccgccaggccgc
cacaagattgtcatcctcgacgaggccgatagcatgacagggggcgcccagcaggcgctg
cgccgtacgatggagatttactccaacacaacgcgttttgcgctggcctgcaacaccagc
agcaaggtcatcgagccgatccagagccgctgcgccattgtgcggttcacgcgcgtcagc
gacgtccaggtgctggcgcggctcaagcaggtggtggaaaaggagggcgtcacctgcacc
cctgacggcctcgaggccgtggtgttcaccgcggacggggacatgcggcaggccctcaac
aacctgcaggccacccacaccggctttggtgacatcacccaggacaacgtcttcagggtg
tgcgaccagccacaccccacgctgatccggctggtgctgcagtgctgcgtggcggggcgg
ctcgaggaggcgtacacgcacatgaaggcgctgtgcgaccaggggtacagcgcaatggac
atcatcacaacgctgttcaggccaggcctctga

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