KEGG   Monoraphidium neglectum: MNEG_8217
Entry
MNEG_8217         CDS       T05028                                 
Name
(RefSeq) subunit of VPS-C complex
  KO
K20183  Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
mng  Monoraphidium neglectum
Pathway
mng04142  Lysosome biogenesis
mng04145  Phagocytosis
mng04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:mng00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    MNEG_8217
   04142 Lysosome biogenesis
    MNEG_8217
   04148 Efferocytosis
    MNEG_8217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mng04131]
    MNEG_8217
Membrane trafficking [BR:mng04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    MNEG_8217
SSDB
Motif
Pfam: zf-Vps39_C Vps39_1
Other DBs
NCBI-GeneID: 25741093
NCBI-ProteinID: XP_013898768
UniProt: A0A0D2KWW2
LinkDB
Position
Unknown
AA seq 783 aa
MAVAAPHPSPHDGSLFVASAAAGGGVRRLRPVPIERQARLLAGGGEFSGALELCARLPAP
RRRQLEDALRLRFCRHLFEAGDVDDALTQLSMCSDAGPLLLLRLFPGLVPAKFRPLLPDE
AYGEKLPDLDADEDAAAAAAGDGAPRRDAAGGVDASGTTGAHTHAHGHAGPAGREAAAVG
VVVPYLLSYRTRLLAAMEEAAAASAAAAAAAAGEQDGGGGGGEGAAGRQQQQQQQRKPAK
PKRPVRRPGQPGGDAAAVAGAAQQGLASRPPEPPPGGAAAGAPEPAGSDDGAPPPPEVVA
TVLDTALLLAMLAQPDTGAALRLLQQRNFVDAAEGERALAAAGRYAELAALLQYTGQHAK
GLELLRRLSQEPALLPVKPAGAAADLPGLPGVWAAVRYLTNLTPPNLALAEAHAGWLLRA
DPEAGLEAFLQMRPPLPAAAVLPILQRHAPDYCVVYLESALELGVASPGDFHSLLLTQYL
AMALEEEEGGGDRQGAGPMHWEKVDPPASAARHARKLSLSDSLLAKTRHPLEKLFPDGGP
HAAAAAAAAHVAGGKAAGGEAEGGAAEGADSSRRDAYDRLKELVYSSPHIDPEVVLVQLP
TGKLPEIRALMLERLGRHSKRQRQQQGPSPAAARAPVDLAAWGELGAILSRKAPRIDTSK
VLGMLPDDLPLECLSPLLCAMLQHATERSRNLSVVRSLRRGENLAAREDQVRAKQRSVVL
TSDRACCMCHKRIGGSVLVAHPGGALAHYLCYKRAGEAEGAAGRGGGGAVVTNGGGIWAV
AGL
NT seq 2352 nt   +upstreamnt  +downstreamnt
atggccgtcgccgcgccccacccctccccgcacgacggcagcctcttcgtcgcctccgcc
gccgccggcggcggcgtccggcgcttgcggcccgtgcccatcgagcgccaggcgcggctg
ctggccggcggcggcgagttttccggggcgctcgagctctgcgcgcgcctgccggcgccg
cggcggcggcagctagaggacgcgctgcggctgcggttctgccgtcatcttttcgaggcg
ggcgacgtcgatgacgcgctgactcagctgtccatgtgcagcgacgcggggccgctgctg
ctcctgcggctgttcccgggcctcgtgcctgccaagttccggccgctgctgcctgacgag
gcgtacggcgagaagcttcccgatttggacgctgacgaggacgccgccgccgccgccgcc
ggcgacggggccccgcggcgggacgcggcgggcggcgtcgacgccagcggtacgacaggc
gcgcacacgcacgcgcacggccacgcggggcccgcggggcgcgaggcggcggcggtgggc
gtggtggtgccctacctgcttagttaccgcacgcggttgctcgcggctatggaggaagca
gcggcggcttcggcggcggcggcagcagcggcggcgggtgagcaggatggcggcggtggc
ggcggcgagggcgcggccgggcggcagcagcagcagcagcagcagcggaaaccggcaaag
cccaagcggccggtcaggcgcccaggccagcctgggggcgatgcagcggcggtggcggga
gcggcacagcagggcctggcctcccggccgcccgagccgccgccgggcggcgccgctgcg
ggcgcgccggagccggcaggcagcgacgacggcgcgccgccgccgcctgaggttgttgcg
actgtactcgacacggccctgctgctggcgatgctggcgcagcccgacaccggcgccgcg
ctgcgcctgctgcagcagcgcaacttcgtcgacgctgcggagggcgagcgggcgctggcg
gcggcggggcggtacgctgagctggcggcgctgctgcagtacacggggcagcacgccaag
ggcctcgagctgctgcgccggctcagccaggagcccgccttgctgccggtgaagcccgcg
ggcgcggctgctgacctgcccggcctacctggcgtctgggcggccgtcaggtacttgacc
aacctgacgcccccaaacttggcgctggcggaggcgcacgcgggctggctgctgagggcc
gacccagaggcggggctggaggcattcctgcagatgcggccgccgctgcccgccgcggcg
gtgctgcccattttgcagcgccacgcgccggattactgcgtggtgtacctcgagagcgcc
ctggagctgggggtggcgtcacctggtgacttccacagcctgttactaacgcagtacctg
gcgatggctttggaggaggaggagggcggcggcgacaggcaaggggcagggccaatgcat
tgggagaaagttgacccgcccgcaagcgccgccaggcacgcgcgcaagctgtccctgtca
gattcgctgctggccaagacgcgccaccccctggagaaactcttcccggacggcggcccc
cacgccgccgccgccgccgccgcggcgcacgtggcgggcggcaaggcggcgggcggcgag
gcggagggcggggccgcggagggcgcagacagcagccgtcgcgatgcatacgaccggctc
aaggagctggtctactcatcgccccacatcgaccccgaggtcgtgctggtgcagctgccg
acagggaagctgcccgagatcagggcgctcatgctcgagcgcctcgggcgccacagcaag
cggcagcggcagcagcaggggccgtcgccggcagcggcgcgcgcgcctgttgacctggcg
gcgtggggcgagctcggggcgatactcagccgcaaggccccgcgcattgacacctcaaag
gtgctgggcatgctccccgacgacctccccctggagtgcctgtccccgctgctctgcgcg
atgctgcagcacgccacggagcgctcgcgcaacctctctgtcgtgcgcagcctgcggcgc
ggcgagaacctcgccgcgcgcgaggaccaggtgcgcgcgaagcagcggagcgtggtgctg
acctcggaccgcgcgtgctgcatgtgccacaagcgcatcggcgggagcgtgctggtcgcg
caccccggcggggcgctcgcgcattacctttgctacaaacgcgcgggggaggcggagggg
gccgcgggccgcggcggcggcggcgcggtagtgacaaacggcggcggcatctgggcggtg
gccggcctgtga

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