Monoraphidium neglectum: MNEG_8217
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Entry
MNEG_8217 CDS
T05028
Name
(RefSeq) subunit of VPS-C complex
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
mng
Monoraphidium neglectum
Pathway
mng04142
Lysosome biogenesis
mng04145
Phagocytosis
mng04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
MNEG_8217
04142 Lysosome biogenesis
MNEG_8217
04148 Efferocytosis
MNEG_8217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mng04131
]
MNEG_8217
Membrane trafficking [BR:
mng04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
MNEG_8217
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Vps39_C
Vps39_1
Motif
Other DBs
NCBI-GeneID:
25741093
NCBI-ProteinID:
XP_013898768
UniProt:
A0A0D2KWW2
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MAVAAPHPSPHDGSLFVASAAAGGGVRRLRPVPIERQARLLAGGGEFSGALELCARLPAP
RRRQLEDALRLRFCRHLFEAGDVDDALTQLSMCSDAGPLLLLRLFPGLVPAKFRPLLPDE
AYGEKLPDLDADEDAAAAAAGDGAPRRDAAGGVDASGTTGAHTHAHGHAGPAGREAAAVG
VVVPYLLSYRTRLLAAMEEAAAASAAAAAAAAGEQDGGGGGGEGAAGRQQQQQQQRKPAK
PKRPVRRPGQPGGDAAAVAGAAQQGLASRPPEPPPGGAAAGAPEPAGSDDGAPPPPEVVA
TVLDTALLLAMLAQPDTGAALRLLQQRNFVDAAEGERALAAAGRYAELAALLQYTGQHAK
GLELLRRLSQEPALLPVKPAGAAADLPGLPGVWAAVRYLTNLTPPNLALAEAHAGWLLRA
DPEAGLEAFLQMRPPLPAAAVLPILQRHAPDYCVVYLESALELGVASPGDFHSLLLTQYL
AMALEEEEGGGDRQGAGPMHWEKVDPPASAARHARKLSLSDSLLAKTRHPLEKLFPDGGP
HAAAAAAAAHVAGGKAAGGEAEGGAAEGADSSRRDAYDRLKELVYSSPHIDPEVVLVQLP
TGKLPEIRALMLERLGRHSKRQRQQQGPSPAAARAPVDLAAWGELGAILSRKAPRIDTSK
VLGMLPDDLPLECLSPLLCAMLQHATERSRNLSVVRSLRRGENLAAREDQVRAKQRSVVL
TSDRACCMCHKRIGGSVLVAHPGGALAHYLCYKRAGEAEGAAGRGGGGAVVTNGGGIWAV
AGL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgccgcgccccacccctccccgcacgacggcagcctcttcgtcgcctccgcc
gccgccggcggcggcgtccggcgcttgcggcccgtgcccatcgagcgccaggcgcggctg
ctggccggcggcggcgagttttccggggcgctcgagctctgcgcgcgcctgccggcgccg
cggcggcggcagctagaggacgcgctgcggctgcggttctgccgtcatcttttcgaggcg
ggcgacgtcgatgacgcgctgactcagctgtccatgtgcagcgacgcggggccgctgctg
ctcctgcggctgttcccgggcctcgtgcctgccaagttccggccgctgctgcctgacgag
gcgtacggcgagaagcttcccgatttggacgctgacgaggacgccgccgccgccgccgcc
ggcgacggggccccgcggcgggacgcggcgggcggcgtcgacgccagcggtacgacaggc
gcgcacacgcacgcgcacggccacgcggggcccgcggggcgcgaggcggcggcggtgggc
gtggtggtgccctacctgcttagttaccgcacgcggttgctcgcggctatggaggaagca
gcggcggcttcggcggcggcggcagcagcggcggcgggtgagcaggatggcggcggtggc
ggcggcgagggcgcggccgggcggcagcagcagcagcagcagcagcggaaaccggcaaag
cccaagcggccggtcaggcgcccaggccagcctgggggcgatgcagcggcggtggcggga
gcggcacagcagggcctggcctcccggccgcccgagccgccgccgggcggcgccgctgcg
ggcgcgccggagccggcaggcagcgacgacggcgcgccgccgccgcctgaggttgttgcg
actgtactcgacacggccctgctgctggcgatgctggcgcagcccgacaccggcgccgcg
ctgcgcctgctgcagcagcgcaacttcgtcgacgctgcggagggcgagcgggcgctggcg
gcggcggggcggtacgctgagctggcggcgctgctgcagtacacggggcagcacgccaag
ggcctcgagctgctgcgccggctcagccaggagcccgccttgctgccggtgaagcccgcg
ggcgcggctgctgacctgcccggcctacctggcgtctgggcggccgtcaggtacttgacc
aacctgacgcccccaaacttggcgctggcggaggcgcacgcgggctggctgctgagggcc
gacccagaggcggggctggaggcattcctgcagatgcggccgccgctgcccgccgcggcg
gtgctgcccattttgcagcgccacgcgccggattactgcgtggtgtacctcgagagcgcc
ctggagctgggggtggcgtcacctggtgacttccacagcctgttactaacgcagtacctg
gcgatggctttggaggaggaggagggcggcggcgacaggcaaggggcagggccaatgcat
tgggagaaagttgacccgcccgcaagcgccgccaggcacgcgcgcaagctgtccctgtca
gattcgctgctggccaagacgcgccaccccctggagaaactcttcccggacggcggcccc
cacgccgccgccgccgccgccgcggcgcacgtggcgggcggcaaggcggcgggcggcgag
gcggagggcggggccgcggagggcgcagacagcagccgtcgcgatgcatacgaccggctc
aaggagctggtctactcatcgccccacatcgaccccgaggtcgtgctggtgcagctgccg
acagggaagctgcccgagatcagggcgctcatgctcgagcgcctcgggcgccacagcaag
cggcagcggcagcagcaggggccgtcgccggcagcggcgcgcgcgcctgttgacctggcg
gcgtggggcgagctcggggcgatactcagccgcaaggccccgcgcattgacacctcaaag
gtgctgggcatgctccccgacgacctccccctggagtgcctgtccccgctgctctgcgcg
atgctgcagcacgccacggagcgctcgcgcaacctctctgtcgtgcgcagcctgcggcgc
ggcgagaacctcgccgcgcgcgaggaccaggtgcgcgcgaagcagcggagcgtggtgctg
acctcggaccgcgcgtgctgcatgtgccacaagcgcatcggcgggagcgtgctggtcgcg
caccccggcggggcgctcgcgcattacctttgctacaaacgcgcgggggaggcggagggg
gccgcgggccgcggcggcggcggcgcggtagtgacaaacggcggcggcatctgggcggtg
gccggcctgtga
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