Monoraphidium neglectum: MNEG_8585
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Entry
MNEG_8585 CDS
T05028
Name
(RefSeq) hypothetical protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
mng
Monoraphidium neglectum
Pathway
mng03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MNEG_8585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mng03009
]
MNEG_8585
Ribosome biogenesis [BR:
mng03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MNEG_8585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp13
WD40
WD40_Prp19
EIF3I
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_Nup120_160
WD_LRWD1
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_NOL10_N
ANAPC4_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
25741461
NCBI-ProteinID:
XP_013898398
UniProt:
A0A0D2KVG3
LinkDB
All DBs
Position
Unknown
AA seq
996 aa
AA seq
DB search
MTQRDIVLCLDAVRDAAGRDLLVSGSKDAEARAWDAATGACLGVAAGHVSAVTAVALARR
AKGGVMVTAGADKLLKAWDMAPVAAAAADWGAIAASGPVQLRTLSAVAAHDKEINADRTI
KLWTLPTLVAGLTLRGHKRGVWAVAFSPVDQVLLSASGDKTLKLWSLKDGACLRTFEGHG
AGVLRCRFATAGLQALSTGADGLLKLWSLRTGECANTFDGHDDRAWALAAGGKHEALLAT
GGADARVVIWEDSTAADAAAAAGEQEQLAQREQDLENALMDKDYAEAARLAFELRHPGRL
LGVLRALGAAGAGPAAQQIWNTNARNCHVAQAMLRALLSSRAPQELLAVPGARELFDGLL
AYSERHAARMDRLLRASYLLDYTLAASGVLLPGEGDADGGGGKAGGDEAGRGGDGGGSDD
EDGGGELAAFGGAAARQPNGDPSRGAAGRSGDDLSDDFAGWANGNGNGASGSGSEEGDSS
GEDDDAGGSQGAGAESSSEEEEEEEGQGASDDGGELAEAGHSSGGGSSSSGDQEEEGEED
GEEGEETAAAAGSSDGDEPEGGLEESSGDGGEEDDEQGAEDGEGEYEETAEKQQEQRPSR
KGRHSPALQQRGRRKQQLEAPSRAAAGKRRGAAASAAAAPAKRARAAPAAAEAALAAARG
RRGAAELINSEGTVVRFPVRGRADLVDIPSRGLPGTLHASTPEGVNPADFDLAVLGMQES
QYGEDGVKQLMARIGASGVPCLAIMNMPPLAYLRRIPGLDADALKGCYTDSSVWDAFDPV
NVTLASPDPQAFRPPDQGKNVLQVGLPTNFKAARFAGDAPTALLRRLEAEIEAARFEVGG
EPLEIPTKLKVFDSLFVPLAKWPMLLTGNYRCVTADGMVPIVEAVHGDAALSRSIYEWVV
DVCVKLGADRADLVPFEKYAAAAEGLKKPSSAARSAFGGAVSIERVDKLVAAIAGQLGLE
NAHVAEVVRLVDARLAGNRAAAAAAAAVKEAPVAAS
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaagggacattgttctgtgcctggacgccgtccgcgacgccgccggccgcgac
ctcctcgtttcgggctccaaggacgccgaggcgcgcgcctgggacgccgcgaccggcgcc
tgcctgggcgtcgccgccggccacgtcagcgccgtcaccgcggtcgcgctggcgcgcagg
gccaaggggggcgtcatggtcacggccggtgcggacaagctgctcaaggcgtgggatatg
gcgccggtggcggcggcggccgcggactggggcgcgatcgcagcctctggcccggtccag
ctgcgcacgctgtcggcggtggcggcgcacgacaaggaaatcaacgcggaccgcaccatc
aagctgtggaccctgccgacgcttgtcgcgggcttgacgctgcgcggccacaagcgcggc
gtgtgggccgtggcgttcagcccagtagaccaggtgctgctgagcgccagcggcgacaag
accctcaagctctggagcctcaaggacggcgcgtgcctgcgcacctttgagggccacggc
gccggcgtgctgcgctgccgcttcgcgacggccggcctgcaggcgctctcgaccggtgcc
gacggcctgctgaaactgtggtcgctgcgcactggagagtgcgccaatacgtttgacggc
cacgacgacagggcctgggcgctggcggcgggtggcaagcacgaggcgctgctcgccact
ggcggcgcggatgcgcgcgtggtgatctgggaggacagcaccgcggcggacgcggcggcg
gccgccggcgagcaggagcagctggcgcagcgcgagcaagacctggagaacgcactcatg
gacaaggattacgccgaggcggcccgcctggcgttcgagctgcgccaccccggccgcctg
ctgggcgtgctgcgcgcgctgggcgcggccggcgcggggccggcggcgcagcagatctgg
aacaccaacgcgcgcaactgccacgtggcccaggccatgctgcgcgcgctgctgtcgtcg
cgcgccccgcaggagctgctcgcggtgccgggggctcgcgagctatttgacggcctcctg
gcctacagcgagcgccacgcggcgcgcatggaccgcctgctgcgcgcctcgtacctgctc
gattacaccctggcagcctctggcgtgctgctgcccggggagggcgacgcggacggtggt
ggaggcaaggcgggcggcgacgaggcgggccgcggcggcgacggcggtgggagcgacgac
gaggacggagggggggagctggcggcgttcggcggggcggcggcgcggcagcccaatgga
gacccgtcgcgtggcgcagccggccgcagcggcgacgacttgtcggacgactttgctggt
tgggccaacggcaacggcaacggcgccagcggcagcggcagcgaagagggcgacagcagc
ggcgaagacgatgatgccggcggctcgcagggcgcgggcgctgagagcagcagcgaagaa
gaggaagaggaggagggacagggggcctctgacgatggtggtgagctggctgaggctggc
cacagcagcggcggcggcagcagcagcagcggcgaccaggaagaggagggtgaagaggac
ggggaggaaggcgaggagacggcggctgcggcggggtccagcgacggggacgagccggag
ggtggacttgaggagagcagtggagacggaggtgaggaggatgatgagcaaggggccgag
gacggcgaaggagaatatgaggaaacggcggagaagcagcaggagcagcggccgtcgcga
aaggggcgtcactcgccggcgctgcagcagcgtggccggcggaagcagcagctcgaggcg
ccctcgcgggcggccgccgggaagcggcggggggccgcggcgtcggccgccgcggccccg
gcgaagcgggcgcgggcggcgcccgccgcggcggaggcggcgctagcagcggcgcggggc
cggcgtggcgcagcggagcttataaacagtgagggtaccgtcgtgcggttccctgtccgt
ggccgcgccgacctggtggatatcccgtcgcgcggcctgccggggacgctgcatgcatcg
acgccggagggggtgaatcctgcagacttcgacctcgccgtcctgggaatgcaagagtcg
cagtacggcgaggacggcgtcaagcagctgatggccaggatcggcgcgtcgggcgtcccc
tgcctagcaatcatgaacatgccgccgctcgcgtacctgcgtcgcatcccgggcctcgac
gccgacgcactcaagggctgctacaccgactcctcagtctgggacgcctttgacccggtc
aacgtgacactggctagccccgacccccaggccttccggcccccagatcagggcaagaac
gtgctgcaggtcgggctgccgacaaacttcaaggcggcgcgcttcgccggcgacgcgccg
acggcgctgctgcggcggctcgaggccgagatcgaggcggcgcggtttgaggtcggcggc
gagcccctcgagattcccacgaagctcaaggtgtttgactcgctgtttgtgccgctggcc
aagtggccgatgctgctgacgggcaactaccggtgcgtcacggccgacggcatggtcccc
atagtggaggccgtgcacggcgacgcggcgctgtcgcgctccatctacgagtgggtggtg
gacgtctgcgtgaagcttggcgccgaccgggccgacctggtgccctttgagaagtatgcg
gcggccgccgagggcctgaagaagccgtcgtccgccgcgcggtccgcgtttggcggcgcg
gtcagcatagagcgcgtggacaagctcgtggcggcgatcgcggggcagctggggctggag
aacgcgcacgtggcggaggtggtgcggctggtggacgcgcggctggccggcaaccgggcg
gcagcggcggcggcggcggcggtcaaggaggcgccggtcgcagcgtcgtga
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integrated database retrieval system