Monoraphidium neglectum: MNEG_9220
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Entry
MNEG_9220 CDS
T05028
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mng
Monoraphidium neglectum
Pathway
mng03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MNEG_9220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mng03400
]
MNEG_9220
DNA repair and recombination proteins [BR:
mng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
MNEG_9220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_III
MutS_II
MutS_I
MutS_IV
Exonuc_VII_S
Motif
Other DBs
NCBI-GeneID:
25742095
NCBI-ProteinID:
XP_013897759
UniProt:
A0A0D2M5K4
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MAAKTDAPELTLDANSQTGFFKWFKSLDQDPKLLRFFDRKGFYSCHGENALFVARTFYRT
TAVVKYLGAAGGGAGGGAGTPPPGAAGLPSVTLNRQLFEGALRDLLLEGGQHSVELWDGY
GAHWKVAKSASPGRLSAFEDELFRGGEAADAPLVAAVALGYSEGQRTVGAAFLDPGNRRL
GACQFVDDEHFCSLEALLVQLGAREVVIQKPADGEKSDKGGGGGGAPGAAGAGADARRLA
DVLDRVGAMGSERPRALFAAKHLEQDLGKLLKSETIEQHRDVLERPQACAALSALLAFTE
LTADAAALGKHTLALHDPGRFMRLDAAAQRALHVFPARGDANGTFSLYGLMCRARTAMGK
RRLKVWLKQPLVNAADIAARLDVVEALAGDATLRDGVRDALRGMPDIERLTRKLEAGRIS
LSELCQLYRASSALPRLEDALRCHEGPAAALLAERFASPLAAAHDDEHLSKFEMLLEASI
DLDRVPEEYVISASYDPKLQALREQKDAVEDDIQAIATAVAKDLGLVLDKTIKLEWHKAA
NTRTRCLRITQKEEKAVRSRLQA
NT seq
1691 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaaacggacgcccccgagctcacgcttgatgccaactcgcaaaccgggttt
ttcaagtggttcaagagcctcgatcaggaccccaaactcctgcggttctttgacaggaag
ggcttctattcctgccatggagaaaacgcgctgtttgtggcgcgcaccttttaccgcacc
acagccgtcgtcaagtacctgggggcggccggcggcggcgcgggcggcggcgccgggacg
ccgcccccaggggccgcgggcctgccgtcggtgacgctcaaccgccagctgtttgagggc
gctctgagggacctgctgctggagggcggccagcacagcgttgagctgtgggacggatac
ggcgcgcactggaaggtcgcaaagagcgcgtcccccggacggctgtcggcctttgaggat
gagctgttcaggggcggagaggcggccgacgcgccgctggtggcagcggtagcgctgggg
tactcggaggggcagaggacggtgggcgcagcattcctcgacccgggaaacaggcgcctc
ggcgcctgccagtttgtcgacgacgagcacttctgctccctggaggccctgctcgtgcag
ctgggggcgcgcgaggtcgtcatacaaaagccggccgacggcgaaaagtccgacaagggc
ggcggcggcggcggcgcgccgggtgcggcgggtgcaggcgcagacgcgcggcggctggcg
gatgtgctggaccgtgtgggggcgatgggcagcgagcggccgcgggcgctgtttgcggcg
aagcacctggagcaggacttggggaagctgctcaagagcgagaccatagagcagcaccgc
gatgtcctggagcgcccccaggcctgcgccgcgctgtccgcgctgctggccttcacggag
ctcacggccgacgcggccgcgctgggcaagcacacgctggccctgcacgaccccggcagg
ttcatgcgcctggacgcggcggcgcagcgcgcgctgcacgttttcccggcgcgcggagac
gcaaacggcacattcagcctgtacggcctcatgtgccgggcgcgcaccgccatgggcaag
cggcggctaaaggtgtggctcaagcagccgctggtgaacgccgccgacatcgcggcgcgc
ctggacgtcgtcgaggcactcgcgggcgacgccacactgcgcgacggcgtgcgcgacgcg
ctgcgcggcatgccggacatcgagcggctgacccgcaagctggaggcggggcgcatcagc
ctgtcggagctgtgccagctgtaccgcgcgtcgagcgcgctgccgcggctggaggacgcg
ctgcggtgccacgaggggcccgcggccgcgctgctggcggagcggtttgcgtcccccctg
gccgccgcccatgacgacgagcacctgtcaaagtttgagatgctgctggaggcgtccata
gatctggacagggtgcccgaggagtacgtcatctccgccagctacgaccccaagctgcag
gccctgagggagcagaaggacgcggtggaggacgacatccaggccattgccacggctgtc
gccaaggacctgggcctggtgctggacaagaccatcaagctggagtggcacaaggccgcc
aacacgcgcacccgctgcctgcgcatcacgcagaaggaggagaaggccgtgcgcagcagg
ctgcaggcaaa
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