Mycoplasma nasistruthionis: FG904_00905
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Entry
FG904_00905 CDS
T06848
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mnh
Mycoplasma nasistruthionis
Pathway
mnh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FG904_00905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnh03019
]
FG904_00905
Messenger RNA biogenesis [BR:
mnh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FG904_00905
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Motif
Other DBs
NCBI-ProteinID:
QCZ36577
UniProt:
A0A5B7XV70
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All DBs
Position
complement(217457..219346)
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AA seq
629 aa
AA seq
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MIPTRIFALGGAEEIGKSTLVVDHANHVFLIDAGIKFADTFNTGVRGIIPDYSYLNKPEK
ILEGLFITHGHEDHIGGVVYLVKQTNLSKIFAPRIAIQYLKLKFEEHKITRKIDFVEIVK
TDAHKFPEGCKVDFWTAQHSIPDAFGIRITTPNGSLMCTGDFRFDYTPIGNYTDFARLDE
IGKQGLTALLSDSTNAMRENHSPSESDILTDIEAHMRAAKKKIIITAFASNLTRVKVIIE
LAEKLKKKVVVFGRSMVQGIKIGRKLGYINVSNDVLIDKKELNNIKDSDLVVLTTGSQGE
QMAALSRMSYGKHNSIKIIKGDMVIFSSSPIPGNRMVVELLINRLYKQGALIKENGIDGY
LHTSGHAYKWEHDKIFQLTKPKYFLPYHGDYRMCVEHGKTAIENGVKTENVMVPRKGQVF
EMLNGEIKPTNSFVKYGPIYIDGNSVLGLSEQILEQRAQLKNAGFVNIIFLLDKKKNTII
GRPQIVTRGSFFVKTSKELIEEAKRIAHGAVLYHIKNAKANGNNKSWTTQQLEELIKERL
SALFYKEKRRNPIIVPTIIYTDEPDDADFKQQKVKFITYKEYEAQKEDEPKSRSTKSKKT
AKNQLEKAKEAIFGEVDQEELEIDEEDEI
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgattccgactcgtatttttgcactaggtggtgcagaagaaattggtaaatcaacttta
gttgttgaccatgctaatcatgtatttttaattgatgcaggaattaaatttgcagacact
tttaacacaggtgttagaggtattattcctgattattcttacttaaataaaccagaaaaa
atacttgaaggtttatttataactcatggacacgaagatcacattggtggagttgtttat
ctggttaaacaaacaaatttaagcaaaatttttgctccaagaattgctattcaatacttg
aagttgaaatttgaagaacacaaaatcactcgtaagattgattttgttgaaattgtaaaa
actgatgctcataaattccctgaaggatgtaaagtagatttctgaactgcacaacactca
attccagatgcgtttggtattagaataactactccaaacggttctttaatgtgtactggt
gatttcagatttgactatactccaattggaaactatactgactttgctcgtttagatgaa
attggaaaacaaggcttaacagcgcttttatctgattcaacaaatgcaatgcgtgaaaat
cactcaccttctgaaagtgatattttaaccgatattgaagcacatatgcgtgcagctaaa
aagaaaattattattactgcattcgcttctaacttaacaagagttaaggttattattgaa
ctagctgagaagttaaagaaaaaagttgttgtttttggtcgttcaatggtgcaagggatt
aaaatcggtcgtaaattaggatacataaatgtttcgaatgatgttttaattgacaaaaaa
gaactaaacaatattaaagattcagatttagttgttctaacaactggttcacaaggtgaa
caaatggctgctttatcaagaatgagttatggaaaacacaacagtatcaaaatcattaaa
ggtgatatggtaattttctcatcaagcccaatccctggtaatagaatggttgtcgaacta
ttaattaaccgtttatacaaacaaggtgcattaatcaaagaaaatggaattgatggatat
ttacatacatcaggacacgcttataaatgagagcatgataaaatttttcaattaactaaa
cctaaatacttcttaccataccatggtgattacagaatgtgtgttgagcatgggaaaacc
gcaattgaaaatggtgtaaagactgaaaatgtcatggtgccgcgtaaaggtcaagttttt
gaaatgttaaatggtgaaattaaaccaacaaattcgtttgttaaatatgggcctatttac
attgacggaaactcagttttaggattgtcagaacaaatactagaacaaagagcacagtta
aaaaatgctggttttgttaacatcattttcttattagacaaaaagaaaaacactattata
ggacgtccgcagattgttactagaggtagtttctttgttaaaacttcaaaagaattaatt
gaagaagccaagagaatagcgcatggtgctgttttataccacattaaaaacgctaaggct
aatggaaacaacaaaagttgaactacacaacaactagaagaattaattaaagaacgttta
tcagctctgttttataaagaaaaaagacgtaatccaattattgtacctacaataatttac
acagacgaaccagatgatgctgattttaaacaacaaaaggttaaatttataacatataaa
gaatatgaagctcaaaaagaagacgagcctaaatcaagaagcacaaaatctaaaaaaaca
gccaaaaatcagctagaaaaagctaaagaagctatatttggtgaagtagatcaagaagaa
ttagaaatcgacgaagaagatgaaatttaa
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