Macaca nemestrina (pig-tailed macaque): 105466084
Help
Entry
105466084 CDS
T08765
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
mni
Macaca nemestrina (pig-tailed macaque)
Pathway
mni04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mni00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
105466084 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mni00536
]
105466084 (COL13A1)
Glycosaminoglycan binding proteins [BR:
mni00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105466084 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
105466084
NCBI-ProteinID:
XP_011713301
Ensembl:
ENSMNEG00000042505
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MVAESTHKAAATGACGPRELGAPGTVALAAARAERGARLPSPGSCGLLALALCSLALSLL
AHFRTAELQARVLRLEAERGEQQMETAILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP
PGPPGPTGRPGLPGDKGAIGMPGRVGVKGQPGEKGSPGDAGLSIIGPRGPPGQPGTRGFP
GFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAP
PPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGI
QGYHGRKGERGMPGMPGKHGAKGTPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK
GEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGRQGDKGEPGAAGEQGPAG
PKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLP
GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGMKGENGHPGSPGEKGEKGETGQAGSP
GEKGEAGEKGHPGAEGLQGVPGPKGEAGLDGAKGEKGIQGEKGDRGPLGLPGASGLDGRP
GPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGHRGFKGEK
GEPGLPGLDGLDAPCPLVWHCPCLPAWPIWASPCV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggagagcacccacaaagcggcagccactggtgcctgcggccctagggagttg
ggcgcgcccgggacggtggctctggcggcggcgcgggcggagcgcggcgcacggctgccg
agtccagggtcgtgcgggctgctggcgctggccctctgctcgctggcactcagcctgctc
gcccactttcggacggcggagctgcaggcccgggtgctgcgcctggaagccgagcgcggg
gagcagcaaatggagacggctattttgggacgagtcaaccaactgctggacgagaaatgg
aagctccactcaaggaggcgccgggaggccccaaagacatctccaggatgtaactgcccg
ccaggacctcctggtcccactggaagacctggactcccaggggacaaaggtgccattggg
atgcctggacgtgtgggagtaaagggccaaccaggcgagaaggggtcccccggagatgct
gggctgtccatcatcggcccccgcggcccccctggtcaaccaggcactcgaggttttcct
ggatttccgggtcccattgggctggatggcaaaccgggccacccaggaccaaagggcgac
atgggtctgacgggtcccccaggacagccgggacctcagggacaaaaaggagaaaagggt
cagtgtggagagtacccacaccggctgctgcctctcctcaattcagtgcgactggctcca
cccccggtcataaaaaggcggacattccagggtgaacagagccaagccagcatccaaggt
ccaccagggcccccaggcccccctggaccaagtggacctctggggcacccaggactgcca
gggcccatggggccacccggcttacctgggcctcctggaccaaagggagacccagggatc
cagggctaccacggccggaagggagaacggggcatgccagggatgcccggcaagcatgga
gccaagggcactcctggaattgccgtggctgggatgaagggcgagccagggatcccagga
accaagggtgagaagggggctgaaggctcccctgggcttcctggcctcctggggcagaag
ggagagaaaggcgatgctggcaactccattggaggaggcagaggggaacctggccctcca
gggctccctggacccccagggccaaagggagaagcgggtgtcgatggccaggtcggcccc
ccagggcggcaaggagacaagggggagcctggagcagctggagaacagggaccagctggc
cccaagggctccaagggagaaccagggaaaggagagatggtggattacaatggaaacatc
aatgaggctctccaggagatccggacactggccttgatggggcctcctggtcttcctggg
caaattggcccacctggagctccagggattccaggccagaagggggagattggactgcca
ggccctccaggacacgatggggagaagggacctcgcggtaaaccaggagacatgggccct
cctggtccccaaggccccccaggaaaggatggacctccaggaatgaaaggagaaaacggg
cacccagggagcccaggagaaaagggagagaaaggagagacaggacaagcaggctcgccg
ggagagaaaggagaagccggggagaagggccatccaggagcagaggggctccaaggtgtt
cctggaccaaagggggaagcaggactagatggagcaaaaggagagaaaggcatccaggga
gaaaaaggagaccgtggtcccctgggactacccggagcttcaggtttggacggcaggcct
gggccaccgggtactccaggaccaattggagttccaggcccagcaggaccaaagggcgag
aggggcagcaaaggagaccctgggatgacaggaccaacgggagcagctgggcttcctggt
ttacatggaccacccggggacaagggaaaccggggccaccgaggttttaaaggagagaaa
ggggagccggggttaccagggctggacggactggatgccccatgcccattggtatggcat
tgcccttgcttgcctgcatggccgatttgggcttccccatgtgtgtga
DBGET
integrated database retrieval system
