Macaca nemestrina (pig-tailed macaque): 105478561
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Entry
105478561 CDS
T08765
Symbol
SYMPK
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
mni
Macaca nemestrina (pig-tailed macaque)
Pathway
mni03015
mRNA surveillance pathway
mni04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mni00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105478561 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105478561 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mni03021
]
105478561 (SYMPK)
03019 Messenger RNA biogenesis [BR:
mni03019
]
105478561 (SYMPK)
Transcription machinery [BR:
mni03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105478561 (SYMPK)
Messenger RNA biogenesis [BR:
mni03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
105478561 (SYMPK)
U7-dependent histone pre-mRNA processing factors
105478561 (SYMPK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Motif
Other DBs
NCBI-GeneID:
105478561
NCBI-ProteinID:
XP_011734300
Ensembl:
ENSMNEG00000019439
LinkDB
All DBs
Position
Unknown
AA seq
1281 aa
AA seq
DB search
MDKLTAAMASGSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKIT
VLKQVQELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIAN
LNMLLRDENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLD
SDNDGIRTHAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGK
AALEQLLKFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQ
VSSVRKNLKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSSKDTRKRPRDDS
DSTLKKMKLEPNLGEDDEDKDLEPGPSGTSKASAQISSQSDTDITAEFLQPLLTPDNVAN
LVLISMVYLPEVMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCK
EEPKEEKVVKTESVLIKRRLSAQGQAISVVGSLSSMSPLEEEAPQAKRRPEPIIPVTQPR
LAGAGGRKKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLV
TQFNSGLKAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGSLDKYEDCLIRLLSGL
QEKPDQKDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQY
LHVLLDLSSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGAD
KDTEVAAPWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRG
MGMNSPELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIP
VLNGLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNID
SVKCDMKSIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLG
GFVMNILSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELRE
PLLAHVRSFTPHQQAHIPNSIMTILEASGKQEPEAKEAPAGPLEEDDLEPLALAPGPAPR
PPQDLIGLRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSSLSPSARPGPPPSEEAMDFRE
EGPECETPGIFISMDDDSGLTEAALLDSSLEGPLSKETAAGGLTSKEERSPQTLAPIGED
VVKTPSPAAEDAREPEAKGNS
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctgacggcagccatggcgagtggcagtggggacagcgtcacccgccggagt
gtggcatcacagtttttcactcaagaggaggggccgggaatcgatggcatgaccacctca
gagagggtggtggatcttctgaaccaggcagcgctgatcaccaatgactcaaagatcaca
gtgctcaaacaggtccaggagctgatcatcaacaaagaccccacactactggacaacttc
ctggacgagatcatcgcattccaagcagacaagtcaatcgaagtgcgaaaatttgtcatc
ggcttcatcgaggaggcatgcaagcgagacattgagttgctgctgaaactcattgcaaac
ctcaacatgctcttgagggacgagaatgtgaacgtggtgaagaaggccatcctcaccatg
acccaactttacaaggtggccctgcagtggatggtgaagtcacgggtcattagcgagctg
caagaggcctgctgggacatggtatctgccatggcaggggacatcatcttactgttggac
tctgacaatgacggcatccgcacccatgccatcaagtttgtggagggcctcattgtcacc
ctgtcaccccgcatggctgactcggagataccccgacgccaggagcatgatatcagcctg
gaccgcatccctcgtgaccacccctacatccagtacaacgtactatgggaagagggcaag
gcagccttggagcagctgcttaagttcatggtgcaccctgccatctcttccatcaacctg
acaacagcgctgggctccctcgccaatatcgcccgccagagacccatgttcatgtctgag
gtgatccaggcctatgaaactctgcatgccaacctgcccccgacgctggccaaatcgcag
gtgagcagcgtgcggaagaatctgaagctgcacctgttgagtgtgctgaagcacccggcc
tccttggagttccaggcccagatcaccaccctgctggtggacctgggcacacctcaagct
gagatcgcccgcaacatgccgagcagcaaggacacccgcaagcggccccgcgatgactcg
gactccacactcaagaagatgaagctggagcccaacctgggggaggacgatgaggacaag
gacttggagccaggcccatcagggacctcgaaggcctcagcccagatctccagccagtca
gacacggacatcacagctgagttcctgcagcctctgctgacgcctgataatgtggccaat
ctggtcctcatcagcatggtgtacctgccggaggtcatgccagcctccttccaggccatc
tacacccctgtggagtcagcaggcacagaagcccagatcaagcacctggctcggctcatg
gccacacagatgacagctgccggactgggaccaggtgtagagcagaccaaacagtgcaag
gaggagcccaaggaggagaaggtggtgaagacggagagtgtcctgatcaagcggcgcctg
tccgcccagggccaagccatctcggtggtgggctccctgagctccatgtcccctctggag
gaagaggcaccacaggccaagaggaggccagagcccattatccctgtcactcagccccgg
ctggcaggcgccggtgggcgcaagaaaatattccgtctcagcgacgtgctgaagcccctg
actgatgcccaggtggaagccatgaagctgggcgctgtgaagcggatcctgcgggctgag
aaggctgtggcctgcagcggggcagcccaggtccgcataaagatcctggccagcctggtg
acacagttcaactcgggcctgaaggcggaggtcctgtccttcatcctggaggatgtgcgg
gcccgcctggacctggccttcgcctggctctaccaggagtacaacgcctatctggccgcg
ggtgcctcaggctccctggacaagtatgaggactgccttatccgcctgctgtccggcctg
caggagaaaccagaccagaaggatgggatcttcaccaaggttgtgctggaggcgcccctc
atcacagagagtgccctggaggtgatccgcaagtactgcgaggatgagagtcgcacctac
ctgggcatgtccacgcttcgagacctgatcttcaagcgcccgtcccgccagttccagtac
ctgcatgtccttctcgacctcagctcccatgagaaggacaaggtgcgctcccaggccctg
ctgttcatcaaacgcatgtatgagaaggagcagctgcgggagtatgtggagaaatttgcc
ctcaactacctgcagctcctggtgcaccccaacccaccgtctgtgctgtttggagctgac
aaagacacagaggtggcagcgccctggacggaggagacagtgaagcagtgtctctacctc
tacctggctctcctgcctcagaaccacaagctgatccacgagctggcggccgtgtacact
gaagccatcgctgacatcaagcggacggtgctgagggtcatcgagcagccgatccgagga
atgggcatgaactccccggagctgctcctgctggtagaaaactgtcccaagggggcagag
acactggtcacacgatgtctgcacagcctcacagacaaagtcccaccctccccggagctg
gtgaagcgggtccgggatctctaccacaagcgactgccagacgtccgcttcctcatcccg
gtgctcaatgggctggagaagaaagaggtgatccaggccctgcctaaactcatcaaactc
aaccccatcgtggtgaaggaagtcttcaaccgcctgctgggcacccagcatggtgaggga
aactcagccttgtccccactgaaccctggagagctcctgatcgcattacacaacatcgac
tccgtgaagtgcgacatgaaatccatcatcaaagccaccaacctgtgctttgcggagcgg
aacgtgtacacgtcagaggtgctggccgtggtgatgcagcagctgatggagcagagcccc
ctgcccatgctgctcatgaggaccgtcatccagtccctgaccatgtacccccgcctgggg
ggcttcgtcatgaacatcttgtcccgcctcatcatgaagcaggtgtggaagtaccccaaa
gtgtgggagggcttcatcaagtgctgccagcgcaccaagccccagagcttccaggtcatc
ctgcagctgccgccccagcagctgggagccgtctttgacaagtgccctgagctccgggag
cctctgctggcccatgtccgctccttcaccccccaccagcaagctcatatccctaactcc
atcatgaccatcttggaggccagcggcaagcaggagccagaggccaaggaagcgcctgca
gggcccttggaggaggacgacctggagcctctggccttggccccgggcccggccccccgg
cccccgcaggacctcattggcctgcggctggcccaggagaaggccttaaagcggcagctg
gaggaggagcagaagctgaagccgggaggagtgggagccccctcttcttcctcctcctct
ctctctccctcggcccggccgggcccgcccccgtctgaggaagccatggatttccgggag
gaggggcctgagtgcgagaccccgggcatcttcatcagcatggatgacgactcagggctg
accgaggccgcgctgttggactctagtctcgagggccccctatccaaggagacagcagcg
ggcgggctgacctctaaggaggagcggagcccccagaccctggcacctattggagaagat
gtcgtgaagacccccagcccggctgccgaggatgccagggaacccgaggccaaggggaac
agctga
DBGET
integrated database retrieval system