Macaca nemestrina (pig-tailed macaque): 105480555
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Entry
105480555 CDS
T08765
Symbol
PBRM1
Name
(RefSeq) LOW QUALITY PROTEIN: protein polybromo-1
KO
K11757
protein polybromo-1
Organism
mni
Macaca nemestrina (pig-tailed macaque)
Pathway
mni03082
ATP-dependent chromatin remodeling
mni05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mni00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105480555 (PBRM1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
105480555 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mni03021
]
105480555 (PBRM1)
03036 Chromosome and associated proteins [BR:
mni03036
]
105480555 (PBRM1)
Transcription machinery [BR:
mni03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105480555 (PBRM1)
Chromosome and associated proteins [BR:
mni03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
105480555 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
105480555
NCBI-ProteinID:
XP_024648311
Ensembl:
ENSMNEG00000031931
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MRRLAFRGAGCALVKLKKLDSMGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLS
NLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPXDLMKIQQ
KLKMEEYDDVNLLTADFQLLFNNSKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADD
EDDDEDGQDNQGTVTEGSSPTYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPD
YYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKI
FYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKRAVQG
GRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNN
QGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENA
KRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIR
KQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDK
YAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKL
KLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLT
IKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLET
RRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPP
LTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDEL
CKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGAAG
LSGLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAEKEVFKSDYYN
KVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPISSVR
FVPRDVPLPVVRVASVFANADKGDDEKNTDNSEDSRAEDSFNLEKEKEDVPVEMSNGEPG
CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPEETEH
EPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEIPENDILLCESRYNES
DKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELEGGDD
DIEEMGEEDSEVIEPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMS
GYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKKAEYEERAAKVAEQQERERA
AQQQQPSASPRAGTPVGALMGVVPPPTPMGMLNQQLTPVAGMMGGYPPGLPPLQGPVDGL
VSMGSMQPLHPGGPPPHHLPPGVPGLPGIPPPGVMNQGVAPMVGTPAPGGSPYGQQVGVL
GPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPKTQRLLHSEAYLKYIEGLSAESNSI
SKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAY
NLENV
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactggcttttcgaggcgctggttgtgctctggtaaagctgaagaagctggat
tccatgggttccaagagaagaagagctacctccccttccagcagtgtcagcggggacttt
gatgatgggcaccattctgtgtcaacaccaggcccaagcaggaaaaggaggagactttcc
aatcttccaactgtagatcctattgccgtgtgccatgaactctataacaccatccgagac
tataaggatgaacagggcagacttctctgtgagctcttcattagggcaccaaagcgaaga
aatcaaccagactattatgaagtggtttctcagccanttgacttgatgaaaatccaacag
aaactaaaaatggaagagtatgatgatgttaatttgctgactgctgacttccagcttctt
tttaacaattcaaaggcctattataagccagattctcctgaatataaagctgcttgcaaa
ctctgggatttgtaccttcgaacaagaaatgagtttgttcagaaaggagaagcagatgat
gaagatgatgatgaagatgggcaagacaatcagggcacagtgactgaaggatcttctcca
acttacttgaaggagatcctggaacagcttcttgaagccatagttgtagctacaaatcca
tcaggacgtctcattagcgaactttttcagaaactgccttctaaagtgcaatatccagat
tattatgcaataattaaggagcctatagatctcaagaccattgcccagaggatacagaat
ggaagctacaaaagtattcatgcaatggccaaagatatagatctcctcgcaaaaaatgcc
aaaacttacaatgagcctggctctcaagtattcaaggatgcaaattcaattaaaaaaata
ttttatatgaaaaaggctgaaattgaacatcatgaaatggctaagtcaagtcttcgaatg
aggactccatccaatttggctgcagccagactgacaggtccttcacacagtaaaggcagc
cttggtgaagagagaaatcccactagcaagtattaccgcaataaaagagcagtacaagga
ggtcgtttatcagcaattacaatggcacttcagtatggctcagaaagtgaagaagatgct
gctttagctgctgcacgttatgaagagggagagtcagaagcagaaagcatcacttccttt
atggatgtttcaaatcctttttatcagctttatgacacagttaggagttgtcggaataac
caagggcagctaatagctgaaccttttttccatttgccttcaaagaaaaaataccctgat
tattaccagcaaattaaaatgcctatatcactacaacagatccgaacaaaactgaagaat
caagaatatgaaactttagatcatttggagtgtgatctgaatttgatgtttgaaaatgcc
aaacgctataatgtgcccaattcagccatctacaagcgagttctaaaattgcagcaagtt
atgcaggcaaagaagaaagagcttgccaggagagacgatattgaggacggagacagcatg
atctcttcagccacctctgataccggtagtgccaaaagaaaaagtaaaaagaacataaga
aagcagcgaatgaaaatcttattcaatgttgttcttgaagctcgagagccaggttcaggc
agaagactttgtgacctatttatggttaagccatccaaaaaggactatcctgattattat
aaaatcatcttggagccaatggacttgaaaataattgagcataacatccgcaatgacaaa
tatgcaggtgaagagggaatgatagaagacatgaagctgatgttccggaatgccaggcac
tataacgaggagggctcccaggtgtacaacgatgcacatatcctggagaagttactcaag
gagaaaaggaaagagctgggcccattgcctgatgatgatgacatggcttctcccaaactc
aagctgagtaggaagagtggcatttctcctaaaaaatcaaaatacatgactccaatgcag
cagaaactaaatgaggtctatgaagctgtaaagaactatactgataagagaggtcgccgc
ctcagtgccatatttctgaggcttccctctagatctgagttgcctgactactatctgact
attaaaaagcccatggatatggaaaaaattcgaagtcacatgatggccaacaagtaccaa
gatattgactctatggttgaggactttgtcatgatgtttaataatgcatgtacatacaat
gagcctgagtctttgatctacaaagatgctcttgtactacacaaagtcctgcttgaaacg
cgcagagacctggagggagatgaggactctcatgtcccaaatgtgactttgctgattcaa
gagcttatccacaatctttttgtgtcagtcatgagtcatcaggatgatgagggaagatgc
tacagtgattctttagcggaaattcctgctgtggatcccaactttcctaacaaaccaccc
cttacatttgacatcattaggaagaatgttgaaaataatcgctaccggcggcttgattta
tttcaagagcatatgtttgaagtattggaacgggcaagaaggatgaatcggacagattca
gaaatatatgaagatgcggtagaacttcagcagttttttattaaaattcgtgatgaactc
tgcaaaaatggagagattcttctttcaccggcactcagctataccacaaaacatttgcat
aatgatgtggagaaagagaaaaaggaaaaattgccaaaagaaatagaggaagataaacta
aaacgagaagaagaaaaaagagaagctgaaaagagtgaagattcctctggtgctgcaggc
ctttcaggcttacatcgcacatacagccaggattgtagctttaaaaacagcatgtaccat
gttggagattatgtctatgtggaacctgcagaggccaacctacaaccacatatagtctgt
attgaaagactgtgggaggattcagctgaaaaagaagtttttaagagtgactattacaac
aaagttccagttagtaaaattctaggcaagtgtgtggtcatgtttgtcaaggaatacttt
aaattatgcccagaaaacttccgagatgaggatgtttttgtctgtgaatcacggtattct
gccaaaaccaaatcttttaagaaaattaaactgtggaccatgcccatcagttcagttagg
tttgtccctcgggacgtgcctctgcctgtggttcgcgtggcctctgtatttgcaaatgca
gataaaggtgatgatgagaagaatacagacaactcagaggacagtcgagccgaagacagt
tttaacttggaaaaggaaaaagaagatgtccctgtggaaatgtccaatggtgaaccaggg
tgccactactttgagcagctccattacaatgacatgtggctgaaggttggcgactgtgtc
ttcatcaagtcccatggcctggtgcgtcctcgtgtgggcagaattgaaaaagtatgggtt
cgagatggagctgcatatttttatggccccatcttcattcacccagaagaaacggagcat
gagcccacaaaaatgttctacaaaaaagaagtatttctgagtaatctggaagaaacctgc
cccatgacatgtattctcggaaagtgtgctgtgttgtcattcaaggacttcctctcctgc
aggccaactgaaataccagaaaatgacattctgctttgtgagagccgctacaatgagagt
gacaagcagatgaagaaattcaaaggattgaagaggttttcactctctgctaaagtggta
gatgatgaaatttactacttcagaaaaccaattgttcctcagaaggagccatcacctttg
ttggaaaagaagatccagttgctagaagctaaatttgccgagttagaaggtggagatgat
gatattgaagagatgggtgaagaagatagtgaggtcattgaacctccttctctacctcaa
cttcagacccccctggccagtgagctggacctcatgccctacacacccccacagtctacc
ccaaagtctgccaaaggcagtgcaaagaaggaaggctccaaacggaaaatcaacatgagt
ggctacatcctgttcagcagtgagatgagggctgtgattaaggcccaacacccagactac
tctttcggggagctcagccgccttgtggggacagaatggagaaatcttgagacagccaag
aaagcagaatatgaagagcgggcagctaaagttgctgagcagcaggagagagagcgagca
gcacagcaacagcagccgagtgcttctccccgagcaggcacccctgtgggggctctcatg
ggggtggtgccaccaccaacaccaatggggatgctcaatcagcagttgacacctgttgca
ggcatgatgggtggctatccgccaggccttccacctttgcagggcccagttgatggcctt
gttagcatgggcagcatgcagccacttcaccctggggggcctccaccccaccatcttccg
ccaggtgtgcctggcctcccgggcatcccaccaccgggtgtgatgaaccaaggagtggcc
cctatggtagggactccagcaccaggtggaagtccatatggacaacaggtgggagttttg
gggcctccagggcagcaagcaccacctccatatcccggcccacatccagctggaccccct
gtcatacagcagccaacaacacccatgtttgtagctcccccaccaaagacccagcggctt
cttcactcagaggcctacctgaaatatattgaaggactcagtgccgagtccaacagcatt
agcaagtgggatcagacactggcagctcgaagacgcgacgtccatttgtcaaaagaacag
gagagccgcctaccctctcactggctgaaaagcaaaggggcccacaccaccatggcagat
gccctctggcgccttcgagatttgatgctccgggacaccctcaacattcgccaagcatac
aacctagaaaatgtttaa
DBGET
integrated database retrieval system
