Macaca nemestrina (pig-tailed macaque): 105485314
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Entry
105485314 CDS
T08765
Symbol
UPF1
Name
(RefSeq) regulator of nonsense transcripts 1 isoform X1
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
mni
Macaca nemestrina (pig-tailed macaque)
Pathway
mni03013
Nucleocytoplasmic transport
mni03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mni00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105485314 (UPF1)
03015 mRNA surveillance pathway
105485314 (UPF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mni03019
]
105485314 (UPF1)
Enzymes [BR:
mni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105485314 (UPF1)
5.6.2.5 RNA 5'-3' helicase
105485314 (UPF1)
Messenger RNA biogenesis [BR:
mni03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105485314 (UPF1)
mRNA cycle factors
Common to processing body (P body) and stress granule
105485314 (UPF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
SLFN-g3_helicase
NPHP3_N
ATPase
nSTAND3
Helicase_RecD
DEAD
AAA_16
UvrD-helicase
SRP54
UvrD_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
105485314
NCBI-ProteinID:
XP_011745923
Ensembl:
ENSMNEG00000000046
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAG
GPGGAGAGAAAGQLDAQVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEEDTYYTKDLPI
HACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETV
LECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLS
WLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAY
QYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDLVII
WLRDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNANLTQHTDYGDEIAIELRSSVGA
PVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPK
RFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCA
PSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLK
DETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQA
TEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQ
YRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSG
TSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEV
EIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSK
QPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAI
IPGSVYDRSSQGRPSSMYFQTHDQIGMISAGPSHVAAMNIPIPFNLVMPPMPPPGYFGQA
NGPAAGRGTPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQGYISM
SQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGERAYQHGGVTGLSQY
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggaggcgtacgggcccagctctcagactctcactttcctggacacggaggag
gccgagctgctcggcgccgatacacagggctccgagttcgagttcaccgactttactctt
cctagccagacgcagacgccccccggcggccccggcggcccgggcggtggcggcgcggga
ggcccaggcggcgcgggcgcgggcgccgcggcgggacagctcgacgcgcaggttgggccc
gaaggcatcctgcagaatggggctgtggacgacagtgtagccaagaccagccagttgttg
gccgagttgaacttcgaggaagatgaagaagacacctattacacgaaggatctccccata
cacgcctgcagttactgtggaatacacgatcctgcctgcgtggtttactgtaataccagc
aagaagtggttctgcaacggacgtggaaatacttctggcagccatattgtaaatcacctt
gtgagggcaaaatgcaaagaggtgaccctgcacaaggacgggcccctgggggagacagtc
ctggagtgctacaactgcggctgtcgcaatgtcttcctcctcggcttcatcccagccaaa
gctgactcggtggtggtgctgctgtgcaggcagccctgtgccagccagagcagcctcaag
gacatcaactgggacagctcgcagtggcagccactgatccaggaccgctgcttcctgtcc
tggctggtcaagatcccctccgagcaggagcagctgcgggcgcgccagatcacggcacag
cagatcaacaagctggaggagctatggaaggaaaacccttctgccacgctggaggacctg
gagaagccgggggtggacgaggaaccgcagcacgtcctcctgcggtatgaggacgcctac
cagtaccagaacatattcgggcccctggtcaagctggaggccgactacgacaagaagctg
aaggagtcccagactcaagataacatcacggtcaggtgggacctgggccttaacaagaag
agaatcgcctacttcactttgcccaagactgactctggtaatgaggatttagtcataatt
tggttaagagacatgcggctcatgcagggggatgagatatgcctgcggtacaaaggggac
cttgcgcccctgtggaaagggatcggccacgtcatcaaggtccctgataatgcaaactta
actcagcacacagattatggcgatgagattgccattgagctgcggagcagcgtgggtgca
cccgtggaggtgactcacaacttccaggtggattttgtgtggaagtcgacctcctttgac
aggatgcagagtgcattgaaaacgtttgctgtggacgagacctcagtgtccggctacatc
taccacaagctgctgggccacgaggtggaggacgtaatcatcaagtgccagctgcccaag
cgcttcacggcgcagggcctccccgacctcaaccactcccaggtttatgccgtgaagact
gtgctgcaaagaccgctgagcctgatccagggcccgccaggcacggggaagacagtgacg
tcggccaccatcgtctaccacctggcccgacaaggcaacgggccggtgctggtgtgtgct
ccgagcaacatcgccgtggaccagctaacagagaagatccaccagacggggctgaaggtc
gtgcgcctctgtgccaagagccgcgaggccatcgactccccagtgtctttcctggccctg
cacaaccagatcagaaacatggacagcatgcctgagctgcagaagctgcaacagctgaaa
gatgagactggggagctgtcgtctgccgacgagaagcggtaccgggccttgaagcgtacc
gcggagagagagctgctgatgaatgcagatgtcatctgctgcacatgtgtgggcgccggc
gacccaagactggccaagatgcagttccgctccattttaatcgacgaaagcacccaggcc
actgagccagagtgcatggttcccgtggtccttggggccaagcagctgatccttgtaggt
gaccactgccaactgggcccggtggtgatgtgcaagaaggcggccaaagccgggctgtcg
cagtcgctcttcgagcgcctggtggtgctgggcatccggcccatccgcctgcaggtccag
taccggatgcaccctgcactcagcgccttcccgtccaacatcttctacgagggctccctc
cagaatggtgtcactgcagcggatcgtgtgaagaagggatttgacttccagtggccccag
cccgataaaccgatgttcttctacgtgacccagggccaagaggagatagccagctcgggc
acctcctacctgaacaggaccgaggctgcgaacgtggagaagatcaccacgaagttgctg
aaggcgggcgccaagccggaccagattggcatcatcacgccctacgagggccagcgctcc
tacctggtgcagtacatgcagttcagcggctccctgcacaccaagctctaccaggaggtg
gagatcgccagtgtggacgcctttcagggacgcgagaaggacttcatcatcctgtcctgt
gtgcgggccaacgagcaccaaggcattgggtttttaaatgaccccaggcgtctgaacgtg
gccctgaccagagcaaggtacggcgtcatcatcgtgggcaacccgaaggcgctgtcgaag
cagccactctggaaccacctgctgaactactacaaggagcagaaggtgctggtggaaggg
ccgcttaacaacctgcgcgagagcctcatgcagttcagcaagccgcgcaagctggtcaac
accatcaacccgggagcccgcttcatgaccacagccatgtatgatgccagggaggccatc
atcccaggctccgtctatgatcggagcagccagggccggccctccagcatgtacttccag
acccatgaccagattggcatgatcagtgccggccccagccacgtggctgccatgaacatt
cccatccccttcaacctggtcatgccgcccatgccaccgcctggctattttggacaagcc
aacgggcctgctgcaggccgaggcaccccgaaaggcaagactggccgtgggggacgccag
aagaaccgctttgggcttcctgggcccagccagaccaacctccccaacagccaagccagc
caggatgtggcgtcacagcccttctctcagggcgccctgacgcagggctacatctccatg
agccagccctcccagatgagccagcccggcctctcccagccggagctgtcccaggacagt
taccttggtgatgagtttaaatcacaaatcgacgtggcgctctcgcaggactccacgtac
cagggagagagggcgtaccagcatggcggggtgacggggctgtcccagtactaa
DBGET
integrated database retrieval system
