Macaca nemestrina (pig-tailed macaque): 105498962
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Entry
105498962 CDS
T08765
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
mni
Macaca nemestrina (pig-tailed macaque)
Brite
KEGG Orthology (KO) [BR:
mni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mni04131
]
105498962 (VPS13A)
Membrane trafficking [BR:
mni04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
105498962 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
105498962
NCBI-ProteinID:
XP_024642569
Ensembl:
ENSMNEG00000033084
LinkDB
All DBs
Position
Unknown
AA seq
3056 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVDLDTSQLSLGIWKGAVALKNLQIKENALSQLDVPFKVKVG
HIGNLKLIIPWKNLYSQPVEAVLEEIYLLIVPSSRIKYDPIKEEKQLMEAKQQELKRIEE
AKQKVVDQEQHLPEKQDTFAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQ
NLSMQTTDQYWVPCLHDETEKLVRKLIRLDNLFAYWNVKSQMFYLNDYDDSLDDLRNGIV
NENIVPEGYDFVFRPISANAKLVMNRRSDFDFSAPKINLDVELHNIAIEFNKPQYFSIME
LLESVDMMTQNMPYRKFRPDVPLHHHAREWWAYAIHGVLEVNVCPRLRMWSWKHIRKHRG
KMKQYKELYKKKLTSKKPPGELLVSLEELEKTLDVLNITIARQQAEVEVKKAGYKIYKEG
VKDPEDNKGWFSWLWSWSEQNTNEQQPDVKPGILEEMLTPEEKALLYEAIGYSETAVDPT
LPKTFEALKFFVHLKSMSVVLRENHQKPELIDIVIEEFSTLIVQRPGAQAVKFETKIDSF
HITGLPDNSEKPRLLSSLDDAMSLFQITFEINPLDETVTQRCIIEAEPLEIIYDARTVNS
IVEFFRPPKEVHLAQLTSATLTKLEEFRNKTATGLLYIIETQKVLDLRINLKASYIIVPQ
DGIFSPTSNLLLLDLGHLKVTSKSRSELPDVKQGEANLKEIMDIAYDSFDIQLTSIQLLY
SRVGDNWREARKLNVSTQHILVPMHFNLELSKAMVFMDVRMPKFKIFGKLPLISLRISDK
KLQGIMELVESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIPLLELPSVSEDDSE
EEFFDAPCSPLDEPLQFPTGVKSIRTRKLQKQDCSVNMTTFKIRFEVPKVLIEFYHLVGD
CELSVVEIHVLGLGTEIEIRTYDLKANAFLKEFCLKCPEYLDENRKPVYLVTTLDNTMED
LLTLEYVKAEKNVPNLKSTYNNVLQLIKVNFSSLDIHLHTEALLNTINYLHNILPQSEEK
SAPVSTTETEDKGDVIKKLALKLSTNEDIITLQILAELSCLQIFIQDQKRNISEIKIEGL
DSEMIMRPSETEINAKLRNIIVLDSDITAIYKKAVYITGKEVFSFKMVSYMDATAGSAYT
DMNVVDIQVNLVVGCIEVVFVTKFLCSILDFIDNFQAAKQALAEATVQAAGMAATGVKEL
ARRSSRMALDINIKAPVVVIPQSPVSENVFVADFGLITMTNTFHMITESQSSPPPVIDLI
TIKLSEMRLYRSQFINDAYQEVLDLLLPLNLEVVVERNLCWEWYQEVPCFNVNAQLKPME
FILSQEDITTIFKTLHGNIWYEKDGSASPAVTKDQYSATSGVTTNASHHSGGATVVTAAV
VEVHSRASLVKTTLNVSFKTDYLTMVLYSPGPKQASFTDVRDPSLKLAEFKLENIISTLK
MYTDDSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDIKYRKVRDGCVTDA
VFQEMYICASVEFLQTVANVFLEAYTTGTAVETSVQTWTAKEEVPTQELEKWEINVIIKN
PEIVFVADMTKNDAPALVITTQCEICYKGNLENSTMTAAIKDLQVRACPFLPIKRKGKVT
TVLQPCDLFYQTTQAGTDPQVIDMSVKSLTLKVVHYYNEMFGVWEPLLEPLEIDQTEDFR
PWNLGIKMKKKAKKAIVESDPEEENYKVPEYKTIISFHSKDQLNITLSKCGLVMLNNLAK
AFTEAATGSSADFVKDLAPFIILNSLGLTISVSPSDSFSVLNIPMAKSYVLKNEESLSMD
YVRTKDNDHFNAMTSLSSKLFFILLTPVNHSTADKIPLTKVGRRLYTVRHRESGVERSIV
CQIDTVEGSKKVTIRSPVQIRNHFSVPLSVYEGDTLLGTASPENEFNIPLGSYRSFLFLK
PEDEDYQRCEGIDFEEIVKNDGALLKKKCRSQNPSKKSFLINIVPEKDNLTSLSVYSEDG
WDLPYIMHLWPPILLRNLLPYKIAYYIEGIENSVFTLSEGHSAQICTVQLDKARLRLKLL
DYLNHDWKSEYHIKPNQQDISFVNFTCITEMEKTDLDIAVHMTYNTGQTVVAFHSPYWMV
NKTGRMLQYKADGIHRKHPPNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVG
SHGAVKCKGLKMDYQVGVTIDLSSFNITRIVTFTPFYMIKNKSKYRISVAEEGTDKWLSL
DLEQCIPFWPEDASSKLLIQVEGSEDPPKRIYFNKQENCILLRLDNELGGIIAEVNLAEH
STVITFLDYHDGAATFLLINHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRL
KWRCRKSHGEVTQKDDMMMPIDLGKKTIYLVSFFEGLQRIILFTEDPKVFKVTYESEKAE
LAEQEIAVALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLE
REFKEYTESSPSEDKVIELDTNIPVRLTPTGHNMKILQPRVIALRRNYLPALKVEYNTSA
HQSSFRIQIYRIQIQNQIHGAVFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQI
SRIKYFKVLIQEMDLRLDLGFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASLV
DQSQVSLYEYFHISPLKLHLSVSLSSGGEEAKDSKQNGGLIPVHSLNLLLKSIGATLTDV
QDVVFKLAFFELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSE
GVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAMTMD
EDYQQKRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGV
GKGLVGAVARPTGGIIDMASSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGTG
NQMLQVMENGRFAKYKYFTHVMINKTDMLMITRRGVLFVTKGTFGQLTCEWQYSFDEFTK
EPFIVHGRRLRIEAKERVKSVFHAREFGKIINFKTPEDARWILTKLEEAREPSPSL
NT seq
9171 nt
NT seq
+upstream
nt +downstream
nt
atggttttcgagtcggtggtcgtggacgtattgaaccggttcttgggtgactatgtggtg
gacctggacacgtcccagctctctctgggcatctggaaaggagctgtggccctcaagaat
cttcaaattaaagaaaatgccctgagtcaactggatgtaccatttaaagttaaagttggt
cacataggtaatcttaaacttataattccatggaaaaacctttattctcaacctgttgaa
gctgtattggaagaaatttatttactcatagtgccttcttctagaataaaatatgatcct
ataaaagaagagaaacaactcatggaagcaaagcaacaggaactgaaaagaatagaagaa
gcaaaacaaaaagtagttgatcaagaacaacatctgccggaaaaacaggacacttttgca
gaaaaattagttacacagatcataaaaaatcttcaagtgaaaatttccagtatccatatt
cgttatgaagatgatatcacaaatcgggacaaaccgctgtcatttggtatttcccttcaa
aatctcagcatgcagacaactgatcaatactgggttccatgtttacatgatgaaactgag
aaactagttcgtaagttaatccgattggataacctttttgcctattggaatgtgaagtct
cagatgttttatcttaatgattatgatgactccttggacgacttgaggaatggcattgtc
aatgaaaatattgttccagaaggttatgactttgtgtttcgtcccatatctgctaatgcc
aaacttgtgatgaatcgccgatctgattttgacttttctgcccccaaaataaacttggat
gttgagttacataacatagcaattgaatttaataaaccacagtatttcagtattatggag
cttcttgaatcagttgatatgatgacacaaaatatgccatataggaagttcagacctgac
gtgcctcttcaccaccatgccagagaatggtgggcttatgctatacatggtgttcttgaa
gtaaatgtttgccccaggttacggatgtggtcatggaagcatattagaaaacatagggga
aaaatgaagcaatataaagaactgtataaaaaaaagttaacaagtaagaagccacctggt
gaacttctcgtgtctttggaggagttggaaaaaaccttggatgtccttaatataactata
gctagacagcaggcagaagttgaggtaaagaaagctggatacaaaatttacaaagaagga
gtaaaagatccagaggataataaagggtggtttagctggctatggtcttggtcagaacaa
aatactaatgaacaacaaccagatgttaaacctggaattcttgaagaaatgttgacacct
gaagaaaaagctttactctatgaagcaattggctatagtgaaacagcagttgatccaact
ttgccaaaaacatttgaagccttgaagttttttgtccacttgaaaagtatgtctgttgtt
ctaagagaaaatcatcaaaaacctgagctgatagatattgtaatagaagaatttagcacc
ttaattgtgcaaagaccaggagcgcaagcagtaaaatttgaaactaaaatagattcattt
catattactggcttaccagataattcagaaaaaccccgcctcctgtcttcattggatgat
gcaatgtcactcttccaaattacatttgagataaatccattagatgaaactgttactcag
aggtgtatcatagaagctgaacctttagaaatcatatatgatgcaaggacagtgaatagt
atagtggaattcttcagacctccaaaagaggtacatctagcacagctaacttcagcaact
ttgacaaaactggaagaatttcgcaataagacagcaacaggtctactgtatattattgaa
acacagaaagttcttgatctcagaattaatttgaaggcttcatatattattgtcccacaa
gatggaatttttagtcctacatcaaatctgcttcttttggaccttggtcatcttaaggtg
acaagtaaaagtcgttctgaattaccagatgtgaaacaaggtgaggccaatcttaaagag
ataatggatatagcttatgattcctttgatattcaacttacaagcatacagctgctttac
agtagagttggtgataattggagagaagcacgaaaactcaatgtatctacccagcatatt
ttggtacccatgcacttcaatttggaactgtctaaggccatggttttcatggatgtaagg
atgcccaaattcaagatttttggaaagttacctcttatttctttacgaatctcagataaa
aaactacaagggattatggaattggttgaaagcattccaaaacctgaaccagtaactgaa
gtatctgcccctgtcaaatcattccagattcaaacatctacttctttgggaacatcacag
atttcacagaaaataattcctctcttggaacttccgtctgtttctgaagatgattcagag
gaggaattttttgatgcaccatgtagtcccttggacgaacctcttcagttcccaactgga
gttaaaagtattcgaaccagaaagttacaaaagcaggattgttcagtaaatatgactacg
tttaaaatacgattcgaagtaccaaaggttttgatcgagttttatcaccttgttggagat
tgtgaactatctgtggtagaaattcatgttttaggattgggcacagaaattgagattaga
acatacgatttgaaagcaaatgcctttttgaaagagttctgcttaaaatgcccagaatac
ttggatgaaaacaggaaaccagtttatttggttacaacgctggataacacaatggaagac
ctgttaacgctggaatatgtaaaggctgaaaagaatgtacccaacttgaaaagtacctat
aacaatgttttacaattgattaaggtaaatttttcctctttggatattcatttacacact
gaagcacttctgaatacaataaattatcttcataatatccttccgcaatcagaggaaaaa
tcagccccagtgtccactacagagactgaagacaaaggagatgtcataaaaaaattagct
ttaaaactatccacgaatgaagatatcattactttgcagattttagcagaattatcatgt
ttacagatctttattcaagatcagaaacgtaacatttctgaaattaagattgaagggctt
gattctgagatgattatgaggccttcagaaactgaaataaatgcaaagctaaggaatata
attgttttagattctgatataacagctatatacaaaaaggctgtttatatcactggaaaa
gaagttttcagcttcaaaatggtttcttacatggatgcaactgctggttctgcatacaca
gatatgaatgtggttgacattcaggttaatttagtagttggttgcattgaagtagttttt
gtcacaaaatttctatgttctatattggattttatagataattttcaggcagctaaacaa
gccttggctgaggcaactgttcaggcagctggaatggctgctactggtgtaaaagaactg
gcacgaaggagttccagaatggcactggatattaacatcaaagccccagttgtggtcatc
ccgcagtctccagtttctgaaaatgtttttgttgctgattttgggctaattacaatgaca
aatacctttcatatgataacagagagccagagctctcccccacctgttattgatttgata
acaataaagctgagtgaaatgcgactatacagatctcaatttattaatgatgcataccag
gaagtactggatctactactgccattaaatctggaggtggtggttgaacgaaatttatgc
tgggagtggtaccaggaagttccttgttttaatgtaaatgctcagctgaaaccaatggag
ttcattcttagtcaagaagatataacaactatttttaaaacattgcatggcaatatatgg
tatgaaaaagatggtagtgcctcacctgctgtaacaaaagaccaatacagtgccactagt
ggagttactactaatgcttcacaccattcaggaggagcaactgtggtgacagctgccgtg
gtagaagtacattcacgtgcctcactagttaagacaacactaaacgtgagcttcaaaact
gattatctcaccatggtgctgtatagtccaggtcctaaacaagcttcctttacagatgtt
cgggatccttctctgaaacttgctgaatttaaattggagaatattataagtactttaaaa
atgtatacagatgactcaacattttcttccttctcattaaaaaactgtattttagatgat
aaaaggcctcatgtcaagaaagcaactcctcgaatgataggactgactgttggttttgac
aaaaaagacatgatggatataaagtacaggaaagtcagagatggctgtgtgactgatgca
gtctttcaagaaatgtatatttgtgcaagtgtagaatttctgcagactgttgcaaatgtc
tttctggaggcctacaccacaggcactgctgtagaaaccagtgtgcaaacatggactgct
aaggaagaagtacctacacaggaattagagaagtgggaaattaatgttattattaaaaat
cctgaaattgtgtttgtggctgacatgacaaaaaatgatgctcctgccttagtcattaca
acacaatgtgaaatttgctataaaggtaaccttgaaaatagcacaatgactgctgctatt
aaagatctccaagtgagagcctgcccgtttcttccaatcaagagaaaaggcaaagtcact
actgttttgcagccctgtgacttgttttatcaaactactcaggcaggtacagatccacaa
gtgatcgatatgtcagtaaaatccctgacactaaaggtagtgcattattataatgaaatg
tttggtgtatgggagcctttgcttgaacccttagaaattgatcagactgaggattttaga
ccatggaatcttggtatcaagatgaaaaagaaagccaaaaaggccattgttgagtcagat
cctgaagaagaaaactacaaagtgccagaatataaaactatcattagtttccattcaaaa
gaccaattaaacattacattatccaaatgtggtcttgtaatgttaaataatttagccaag
gcatttacagaagctgccactggatcttcagctgacttcgtaaaggatctggcaccattt
ataattttaaattcccttggacttactatctctgtttcaccaagtgattcttttagtgta
ctcaacattcctatggcaaaatcatatgtattgaaaaatgaagaaagtttaagtatggat
tatgtccgaaccaaggacaatgatcatttcaatgcaatgaccagcctaagcagcaaactc
ttcttcattcttcttacacctgttaaccattctactgctgataagattcctttaacaaaa
gtgggacgacgtctgtacactgtaagacacagagagtctggagttgaaagatctattgtt
tgtcaaattgatacagtggaaggaagtaagaaggtcacaattcgctccccagtgcagata
agaaatcatttttcagtcccactgtctgtttacgaaggggataccttattgggaactgcc
tcacctgaaaatgaattcaacataccattaggatcttaccgatcattcctttttctgaag
ccagaagatgaggactatcaaaggtgtgaaggaattgactttgaagagattgtgaaaaat
gatggtgctcttctaaagaagaaatgtagatctcaaaacccttccaagaaatcatttctc
attaatattgttccagaaaaagataatttaacgtctctatcagtgtattcagaagatggt
tgggatttaccatacataatgcatttgtggccacctatcctgctccgaaatcttcttcct
tacaaaattgcttattatatagagggaattgaaaattcagtttttactctaagtgaagga
cattcagcccagatttgtactgtacagttggataaagccaggctacgtttaaaattactt
gactatctcaatcacgattggaaaagtgaatatcacataaagcctaatcagcaagacatt
agttttgtaaattttacctgtattacagaaatggaaaagactgatttagatattgctgtc
catatgacttataatactggtcagacagttgtggcatttcatagtccttattggatggtc
aacaaaactggtcgcatgttacagtacaaagcagacggaattcatcgaaagcatccacct
aattataaaaagccagttctcttttcttttcagccaaatcacttttttaataacaataag
gttcaacttatggtaactgatagtgaattgtccgatcagttttcaattgatactgttggt
agtcatggagctgttaaatgtaaaggcctgaaaatggactatcaagttggtgtcactata
gacctgagcagttttaacattactagaattgtgacatttacccctttttatatgattaaa
aacaaaagcaaataccgtatatcagtggctgaagaaggaactgataaatggctctctctt
gatttggagcagtgtatccccttttggcctgaggatgcttctagtaaacttcttattcaa
gttgaagggagtgaagatcctcccaaaaggatatattttaacaagcaagaaaactgtatt
ctattgcgtctggataacgagcttggaggtattatagcagaagtgaatttggctgagcat
tctacagttattacatttttagattatcatgatggagcagctacattcctcttaataaat
cacacaaagaatgaacttgttcaatacaatcaaagttctctcagtgaaatagaagattcc
ctccctcctggaaaagcagtgttttatacatgggctgatccagtgggctctagaaggctg
aagtggagatgtagaaaaagccatggtgaagtaacacaaaaggatgatatgatgatgcct
atagatttggggaaaaagactatttatttagtttcattctttgaaggtttacaacgcatt
attttattcactgaagatccaaaggtatttaaagtaacatatgaaagtgagaaagcagag
ttagcagagcaagaaattgcagtggcattacaagatgttggaatttctcttgtcaacaat
tacacgaagcaagaagtagcctatataggcatcacaagttctgatgtggtttgggagaca
aagcccaagaagaaggcaagatggaagccaatgagtgtaaagcacactgagaagttagag
agagaatttaaggaatatactgaatcttcaccttcagaagataaggttattgagttggac
actaacattccggttcgcttaacacctactggtcataacatgaaaattctgcagccacgt
gtaatagctctacgaagaaattatcttccagcattaaaagtggaatataacacatctgca
catcaatcatcatttagaattcaaatctacagaatacagatccaaaatcagatacatggt
gctgtatttccctttgtgttttatcctgttaaacctccaaagtcggtcaccatggattca
gcaccaaagccctttacagatgtcagtattgtcatgagatctgcaggacattcccagata
tcacgtattaagtatttcaaagtattgattcaagaaatggatctcaggttagatcttggg
tttatctatgctttaacagaccttatgacagaagctgaggtaactgaaaatacagaggtt
gagctttttcataaagatatagaagctttcaaagaagaatataaaacagcctcattagta
gatcaatcacaagtcagcctctatgaatattttcatatatctcctctcaagttacattta
agtgtttcactgagttcgggcggagaagaagctaaagattcaaaacaaaatggaggactg
attccagttcattctttaaatcttttgctgaagagtattggtgccacactgacagatgta
caagatgtagtttttaagcttgcattttttgaactcaactatcagttccatacaacatct
gacctacagtctgaagtcataagacactattcaaaacaggccattaagcagatgtatgta
ctcattcttggacttgatgttttgggaaatccatttggcttaattagagaattttctgaa
ggtgtagaagcattcttttatgaaccttaccagggagccatccagggacctgaagagttt
gtggagggaatggcactaggacttaaggcactagttggtggagctgttggtggattagcg
ggtgctgcctccaaaatcaccggtgctatggctaaaggggtagcagctatgaccatggat
gaagactaccaacagaagagaagagaagccatgaataagcaaccagctggttttagagaa
ggcatcactcgtggaggaaaaggcttagtttctggatttgttagtggcataacaggaatt
gttacaaaaccaatcaaaggagctcaaaaagaaggagcagctggtttctttaaaggtgtt
gggaaaggtttagtgggagcagtagcaaggccaactggaggcatcatagacatggctagc
agtacatttcagggaataaaaagagctacagagacttctgaagtggagagtctgcgacct
cctcggttcttcaatgaagatggagttatcagaccgtacaggttgagggatggtactgga
aatcagatgttacaggtcatggaaaatggaagatttgcaaaatacaaatattttacccac
gtcatgatcaataagacagatatgctaatgataaccagacgtggtgtattgtttgtaaca
aagggaacatttggacagctcacgtgtgagtggcagtatagctttgatgagtttaccaaa
gagccattcattgttcatgggagaagattgcgcattgaagcaaaggaacgagtgaagtct
gtatttcatgccagagagtttggaaaaataattaacttcaagaccccagaggatgccagg
tggatccttacaaagctagaagaagcaagagaaccttctccgagcctctga
DBGET
integrated database retrieval system
