Moraxella nasibovis: LU290_01210
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Entry
LU290_01210 CDS
T09322
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mnj
Moraxella nasibovis
Pathway
mnj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mnj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LU290_01210 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnj03021
]
LU290_01210 (rpoC)
03400 DNA repair and recombination proteins [BR:
mnj03400
]
LU290_01210 (rpoC)
Enzymes [BR:
mnj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LU290_01210 (rpoC)
Transcription machinery [BR:
mnj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LU290_01210 (rpoC)
DNA repair and recombination proteins [BR:
mnj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LU290_01210 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Sina_RING
Motif
Other DBs
NCBI-ProteinID:
WFF38888
LinkDB
All DBs
Position
280402..284628
Genome browser
AA seq
1408 aa
AA seq
DB search
MKDLLDIMKGPADNGIKEFDSIQISLASPDTIKSWSHGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDFECLCGKYKRRKFQGIICEKCGVEVTAAKVRRDRMGHIELASPVAHIWFLK
SLPSRIGLLLDITLRDIERVLYFESYIVTDPGMTGLEKYQLLDDEEYFTALEQYGDEFVA
KMGAEAVQDLLKDIDVDGEIDELRASIPQTSSETKLKKMAKRLQLLESFRDSGNKPEWMV
MTVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRM
LQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVG
PTLRLHQCGLPKKMALELFKPFTYAKLLQNNIAQTIKAAKKMVEREEPAVWDMLASVIRE
HPVLLNRAPTLHRLGLQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQL
EARALMMSTNNILSPANGEPIIVPSQDVVLGLYYISRSHVNAKGENMVFSTVNEALRAIG
SDDLSVNAKIKVRVTETIIDEKTGEKTTKTEIKETVAGRLLIWNIMPEGMAFSECNKEMT
KKNISGLLNSCYRKLGVKESVLFADHLMYLGFAQATLSGISIGMEDMVIPPTKKEIMDAA
DSEVREIEQQFEQGFVTAGERYNKVVDIWSRTSDKIANAMMENLSTDEVVNADGEVEREK
SFNSIYMMADSGARGSATQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFISTH
GARKGLADTALKTANSGYLTRRLVDVAQDLVITMDDCGTEAGQRMTPVIDGGEIVERLGD
RVLGRVTAKDVVTADGEMIAPAGTLIDERLVEKLDANAIDEVYVRSVITCESGHGVCAKC
YGRDLARGHLVNIGESVGVMAAQSIGEPGTQLTMRTFHVGGAASAAAVDNSVSVGSNGTV
RFHNMKTVEHADGHLVVVSRSAEIGVADSQGRERERYKVPYGSNVLLRDGAEVNAGDVIA
KWDPHTHPIITEFAGTARFSDITDGMTATMKMDETTGVSSFEILASKDRPSIAKDLRPAI
ILDTTDGKEVVYFLPAETVIRVSEGEQVTAGSVLGRVPQATSGTKDITGGLPRVADLFEA
RRPKDHAIMAEMSGVVSFGKETKGKNRFIITDEDGNVHEELIPKWRQINVFEGETVERGE
VVSDGPQNPHDILRLKGETALANYIVNEVQEVYRLQGVKINDKHIEVIVRQMLRKVEIID
GGDSNYFKGDQAEYTKIRALNEELVANNKFPVQFERQLLGITKASLATESFISAASFQET
TRVLTAAATMGKVDDLTGLKENVVVGRLIPAGTGLAYHQNRKRKAQMAEEASVSDEINLV
DDLLAPSDNLPTEDSFAKAFADELGQDS
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatttattagacatcatgaaaggccctgccgataacggcatcaaagaatttgac
agcattcagatttctttggcaagccctgacaccatcaaatcatggtcgcacggcgaagtt
aaaaaaccagaaaccatcaactaccgcacctttaagcctgagcgtgatggtctgttttgt
gccaaaatctttggccctgtcaaagactttgagtgtctgtgtggtaaatacaaacgccgc
aagttccaaggcatcatctgtgaaaaatgtggcgtagaagtaactgctgccaaagttcgc
cgtgatcgtatgggtcatattgagcttgccagccctgtggctcacatttggttcttaaaa
tcactgccaagccgcatcggtcttttgcttgacatcactttgcgtgacatcgaacgcgtg
ctgtattttgaaagctacatcgtaaccgaccctggcatgactggtcttgaaaaataccaa
ttgcttgatgatgaagagtactttactgctcttgaacagtatggcgatgaatttgttgcc
aaaatgggtgcagaagcggttcaagacctattaaaagacatcgatgttgatggtgagatt
gatgaattgcgtgcgtcaattccacaaaccagctcagaaaccaagctaaaaaagatggca
aaacgcttgcagctgcttgagtcgttccgtgattctggcaacaagcctgaatggatggtg
atgacggtattgccagtattgccaccagatttgcgtccgctggtaccgctagaaggtggt
cgttttgcgacttctgacctaaacgatttgtaccgccgtgtcatcaaccgtaacaaccgt
ctaaagcgtttgctggaattgaacgctcctgacatcatcgtgcgtaacgaaaagcgtatg
ctgcaagaagcggtagatgctctgttagacaacggtcgccgtggtcgtgcaatcacaggc
tcgaacaagcgtccgctaaaatctttggctgacatgattaaaggtaagcaaggtcgtttc
cgtcaaaaccttttgggtaagcgtgtcgattactctggtcgttcggtgatcgtggtaggt
ccgactttgcgtctgcatcagtgcggtctgcctaagaaaatggcacttgagctgttcaag
ccatttacttatgccaagctactacaaaacaacatcgctcagacgattaaagccgccaag
aaaatggtagagcgtgaagagccagccgtttgggatatgttggcaagcgtcattcgtgaa
caccctgtgctactaaaccgtgcgccaactttgcaccgtttgggtctgcaagcatttgaa
cctgtattgattgaaggtaaagcgattcagctacacccgctggtctgtgcggcatttaac
gctgactttgacggtgaccaaatggcggtgcatgtgccattgaccttggaagctcagcta
gaagctcgtgctttgatgatgtctaccaacaacatcttgtcgccagcgaacggcgagccg
atcatcgtaccatcgcaagacgttgttttgggcttgtactacatcagccgtagccatgtc
aatgccaaaggcgagaacatggtatttagtaccgtcaacgaagccttgcgtgcgattggc
tcggacgatttgagcgtcaatgccaaaatcaaagtgcgtgttaccgaaaccatcattgat
gaaaaaactggcgaaaaaaccaccaaaaccgaaatcaaagaaactgtcgcaggtcgtcta
ttgatttggaatatcatgcctgaaggtatggcgtttagcgagtgtaacaaagagatgacc
aaaaagaacatctctggtctgttaaactcatgctatcgcaaacttggcgtgaaagaatcg
gtattgttcgctgaccacttgatgtatctaggttttgcccaagcgactttgtcgggcatt
tcaattggtatggaagacatggtgattccaccaaccaaaaaagaaatcatggacgcagcc
gattcagaagtgcgtgagattgagcaacaatttgagcaaggctttgtaaccgccggtgag
cgttataacaaagttgttgatatttggtctcgtacttccgacaaaatcgccaatgcaatg
atggaaaacttgtctactgacgaagtggtcaatgctgatggcgaagttgagcgtgaaaaa
tcattcaactccatctatatgatggcagactctggtgctcgtggtagcgctactcagatt
cgtcagcttgcaggtatgcgtggtctgatggcaaaaccagacggctcgatcattgaaaca
ccaattaaggcgaacttccgtgaaggtctgaccgttttgcagtactttatttcaacgcac
ggtgctcgtaagggtcttgccgataccgccttgaaaaccgcgaactctggttacttgact
cgtcgtctggtcgatgtggcacaagatttggtcatcacgatggacgattgtggcaccgaa
gcaggtcagcgtatgacgcctgtgattgatggtggcgaaattgtagaacgcctaggcgac
cgtgtgcttggtcgtgttaccgccaaagatgtggtaacggctgatggtgagatgattgca
cctgctggcacgctgattgatgagcgtttggtggaaaaactagatgctaatgcgattgac
gaagtgtatgtgcgttcggtcattacttgtgaatcaggtcatggcgtgtgtgctaagtgc
tatggtcgtgatttggctcgtggtcatctggttaatatcggcgaatctgtgggcgttatg
gcggcacagtcaatcggtgagccaggtactcagctgacgatgcgtactttccacgtgggt
ggtgcggcaagtgcagcagcggtagataatagcgtgtctgtgggtagcaacggtacggtt
cgtttccacaacatgaaaaccgtagaacacgccgatggtcatctggtggtggtatctcgt
tcggcagagattggcgtggcggatagccaaggtcgtgagcgtgagcgttataaagtgcct
tatggttcgaatgtcctgttgcgtgatggtgcagaagtgaatgctggcgatgtcattgcc
aagtgggatccgcacacccacccaatcatcactgaatttgcgggtaccgctcgttttagc
gacatcaccgatggtatgacagcgaccatgaaaatggacgagaccacaggtgttagctcg
tttgaaatcttggcaagtaaagaccgtccaagcatcgccaaagacttgcgtcctgcgatc
atcttggataccacagatggcaaagaagtggtgtacttcctacctgctgagacagtgatc
cgtgtatcagaaggcgagcaggtaactgcaggttcggtgctgggtcgtgtgccacaagcc
acttctggtaccaaagatattaccggtggtctgccacgagttgctgacctgttcgaagct
cgccgtccaaaagatcatgccatcatggcggagatgagcggtgtggtgagctttggtaaa
gaaaccaaaggcaaaaaccgctttatcatcactgatgaagatggcaatgtccacgaagag
ctgattccaaaatggcgtcaaatcaacgtgtttgaaggcgaaacggttgagcgtggcgag
gtggtgtctgacggcccacaaaacccacacgacatcttgcgtctcaaaggcgaaaccgca
cttgccaactacatcgtaaacgaagtacaagaggtttatcgcttgcaaggcgttaagatt
aacgataagcacattgaggtcatcgtgcgtcaaatgctacgcaaagtagaaatcattgat
ggtggtgattctaactactttaaaggcgaccaagcggagtacaccaagattcgtgcgttg
aacgaagagctggtggcgaacaataagttcccagtgcagtttgagcgtcagctattaggt
atcaccaaggcatctttggcgaccgaaagtttcatctcggcagcatcgttccaagagacc
actcgtgtcttgacagcagcagcaacgatgggcaaagtggatgacttgactggtctaaaa
gagaatgtcgtggttggtcgcttgattccagcaggtactggcttggcatatcatcaaaat
cgcaagcgtaaagcacaaatggctgaagaagccagcgtgagcgatgagatcaatttggtg
gatgatttgcttgcaccaagcgacaatttgccaaccgaagacagctttgccaaggcgttt
gctgacgaattgggtcaagacagctga
DBGET
integrated database retrieval system
