Moraxella nasibovis: LU290_05605
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Entry
LU290_05605 CDS
T09322
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mnj
Moraxella nasibovis
Pathway
mnj03030
DNA replication
mnj03430
Mismatch repair
mnj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LU290_05605 (dnaE)
03430 Mismatch repair
LU290_05605 (dnaE)
03440 Homologous recombination
LU290_05605 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnj03032
]
LU290_05605 (dnaE)
03400 DNA repair and recombination proteins [BR:
mnj03400
]
LU290_05605 (dnaE)
Enzymes [BR:
mnj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LU290_05605 (dnaE)
DNA replication proteins [BR:
mnj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LU290_05605 (dnaE)
DNA repair and recombination proteins [BR:
mnj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LU290_05605 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
WFF37754
LinkDB
All DBs
Position
1166789..1170538
Genome browser
AA seq
1249 aa
AA seq
DB search
MAFVHLGVHSEFAIVDSIVRIKDLVKAAKADGQTALGLADLNNMFAVVKFYKACVGAGIK
PIIGVEATIGNAIDRTAEDNAYTVILYAMNNDGYKNLLRLLSDAYTDRPMGENGSVTVHT
PIITKDALFERNDGIIAILTDRSETALALNSSHPEHFLSQVSPWQEVFGDRLYLAIKRTH
TGDDNYNRQAIIYGSQAGIAIIAHNDVRFMNPVPQSVNMGKDDEVASDFDAHEARVCIAT
GWTLDNKDRPRKYTPEQYFRSQDEMTELFADIPQVIENTNLLASRCNVSLTLGINVLPDF
PIPDGETIESFFRKVSAEGLDQRLAKLYPMEQRGDDWAQIFKDYQDRLNYELDIILKMGF
PGYFLIVMDFIRWAKANGVPVGPGRGSGAGSLVAYSLNITDLDPLEYDLLFERFLNPERV
SMPDFDIDFCIEGRDRVIDYVGRTYGRKAVSQIITFGTMAARAVVRDVARVQGKPLGLAD
KMSKLIPKTPGISLAEARSEEPQLEEMLKDGSTHPDHEAALEIWSMAEKLEGITRNVGKH
AGGVLIAPNRISDFSAVYCDDEGHPVSQFDKDDVEAVGLVKFDFLGLRNLTVIQAAMDNI
NLTRAKLSQEPIDLEKLPLDDSDVYESVLQSGNTTAVFQLESSGMKKYLKQLRPTNIEDV
IAMCALYRPGPLESGMVTDFIDRKHGIQEPAYPHPDFQHEWLEPPLKATYGVIVYQEQVM
QIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSIFVDGAIGQGVSGELAGQIFDLVEKF
AGYGFNKSHSAAYGVLAYQTAYLKHYYPAEFMAAVLTSEMDDTDTIVFLISDCKENFGLS
VIPPSVNHSDWRFVVQDDKTIIYGLGAVKGVGEDAVASIVKARKQGKFKDLYDFCNRVDI
KKVGKRALEALICAGCFDDLAVSIKPEFAAQELRHHIRGGLWDQLPAATQVAEQNRQNEL
AGTFDLFGEVDDGLSVAPQLPNVIWGDQTRLKGEKDTLGLYLTGHPLDKYRDELKKYTTV
GHLSELGDTGYNKYARVAGLVIDVANFGNRVAITLDDGSCRVEVSCFTDKFTRLKSVLEA
KTPNATELRKIPKSDWETIEDLNGAIIIAKLSVRESDGRIFARMQDAMTLTQARLKHLSA
VNIKLHAHDTQGLSGILALLKENAPPADMPIIEEEDDIEDATAYDEEGNEIIMPKPTVIK
DGCLPVSLFLYDECSIARLMVNERFRLHPSDTVISGLQAILPPEHIVLK
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgtgcatttgggcgtacatagcgagttcgccatcgttgattccatcgtgcgt
atcaaagatttggtcaaggctgccaaggcggacggacagaccgcactgggactggctgat
ttgaacaatatgttcgctgtggtcaagttttataaagcgtgcgtcggtgctggtatcaag
cccatcatcggcgtagaagccaccatcggcaacgccattgaccgcaccgccgaagacaat
gcctacaccgtcatactctatgcgatgaataatgacggctacaaaaacttacttcgctta
ttgtccgatgcctacaccgaccgaccgatgggcgaaaacggctcggttaccgtgcatacg
cccatcatcaccaaagacgctttgtttgagcgaaatgacggcatcatcgccatcttgacc
gaccgctcagagaccgctttggcattaaatagtagccaccctgagcattttttatcgcag
gtttcgccgtggcaagaagtctttggcgacagactctaccttgccatcaaacgcacgcac
acaggcgatgacaactacaaccgccaagccatcatctacggctctcaggcaggcattgcc
atcatcgcccacaacgatgtgcgttttatgaatcctgtaccacaaagcgtcaatatgggc
aaagatgatgaggtcgccagtgactttgacgcccacgaggctcgtgtgtgcatcgctact
ggctggacacttgataataaagaccgccccagaaaatacaccccagagcagtattttcgc
agtcaagacgagatgactgagctgtttgccgacattccacaagtcattgaaaacaccaat
cttttggcatctcgctgtaatgtcagtttgacgcttggcatcaatgtactgcctgatttt
cccatcccagatggcgagacgattgagagcttttttagaaaagtgagcgccgaaggtctg
gaccaacgccttgccaagctctaccccatggagcagcgtggcgatgattgggcgcagatt
tttaaagactatcaagaccgcctaaactatgagctcgacatcattttaaaaatgggcttt
ccgggttattttctcatcgtcatggactttatccgctgggcaaaagccaatggcgtgcca
gtcggtccagggcgtggctcaggggcaggctcgcttgtggcgtatagcctaaatatcact
gaccttgatccgctagaatacgatttgctgtttgagcgattcttaaaccctgagcgtgtc
tccatgcctgactttgatattgacttttgtatcgaggggcgagaccgtgtgattgactat
gtcggtcgcacctatgggcgaaaggcggtcagccaaatcatcaccttcggtacgatggcg
gctcgtgcggtggtgcgagatgtcgctcgtgtgcagggtaagccgctgggtcttgccgac
aaaatgtccaaactcattccaaaaacccctggtatttcactggcagaagccagaagcgaa
gagccgcagcttgaagaaatgctcaaagatggttccacgcacccagatcatgaggcggcg
ctcgagatttggagcatggctgaaaagctagaaggcatcacccgaaatgtcggcaaacac
gcaggtggggtgctgatcgccccaaatcgcatctcggacttctcggcggtgtattgcgat
gacgaaggacaccctgtcagtcagtttgacaaagacgatgtagaagcggtaggcttggtc
aaatttgacttcttgggactgcgtaacctaacagtcattcaggcagcgatggataacatc
aatttgactcgtgccaaactcagtcaagaacccattgacctagaaaagctcccccttgat
gattcggatgtctatgaatcggtgctacagtcaggcaacaccaccgccgtgttccagctt
gaaagctcaggcatgaaaaagtacctaaaacagctaagacctaccaacattgaagatgtc
attgcgatgtgtgccttgtaccgcccaggacctttggagtctggcatggtaacagacttt
attgaccgcaaacacggcattcaagagcctgcctatccgcacccagattttcagcacgaa
tggctcgagccaccgctcaaagccacctatggcgtcatcgtctatcaagaacaagtcatg
caaatcgcccaagtcctgtcaggctacacgctgggcggtgctgatatgctgcggcgtgcg
atgggtaagaaaaaacccgaagagatggcaaaacagcggagtattttcgttgatggggcg
atcggtcaaggcgtgtcaggcgagctggctggacagatttttgacttggtagaaaagttt
gcaggctacggctttaacaaatcgcactcggcagcctatggcgtgctggcttatcagacc
gcttatttaaagcactactaccctgctgaattcatggcggcggttttgacatcggagatg
gacgacaccgacaccatcgtctttttgatttccgattgcaaagaaaactttggcttgtcg
gtcattccaccaagcgtcaatcacagcgattggcgatttgtggtgcaagacgacaaaacc
atcatctacggtttaggtgcggtcaagggcgtgggcgaagatgcggtggcaagcatcgtc
aaagccagaaaacaaggcaaattcaaagacttatacgatttttgtaatcgtgtggatatt
aaaaaagtcggcaaacgagccttagaagcgctcatctgtgcaggctgttttgatgatttg
gcggtgagcattaagccagaatttgccgcccaagagctgcgtcatcacattcgtggcgga
ctgtgggaccagctacctgccgccacccaagtcgccgaacaaaaccgccaaaacgagctg
gctggcacttttgatttgtttggcgaagttgatgatgggctgtcagtcgctccacaatta
cccaatgtcatctggggcgaccaaactcgtctcaaaggtgaaaaagacacgctagggctg
tatctgacaggacacccactggacaaataccgagacgaactcaaaaaatacaccaccgtc
ggccatttatccgagcttggcgatacgggctacaacaaatacgcacgagtcgcaggcttg
gtcattgatgtggcaaattttggcaaccgagtcgccatcacgcttgatgacggcagttgt
cgtgtggaagtgagctgttttaccgataaattcactcgcctaaaatccgtgctagaagcc
aaaacgcccaacgccaccgaacttcgcaaaatccccaaatccgactgggagaccattgag
gacttaaacggagccatcatcatcgccaaattaagcgtgcgtgaatccgatggacgcatt
tttgccagaatgcaagatgcgatgacgctcactcaggcacggctcaagcatttatccgct
gtcaatatcaagctacacgcccacgacacccaaggcttgtcaggcattttggcattatta
aaagaaaatgccccgcctgcggacatgcccatcattgaagaagaagacgacattgaggat
gcgaccgcctatgatgaagaaggcaacgaaatcatcatgccaaagcccactgtcatcaag
gacggttgtttgcctgtgtcgctgtttttgtatgatgagtgtagcattgcacgactgatg
gtgaatgagcggtttcgtttgcatcctagcgataccgtaatcagtggcttgcaggcgatt
ttaccgccagagcatattgtcttgaaatga
DBGET
integrated database retrieval system
