Moraxella nasibovis: LU290_06055
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Entry
LU290_06055 CDS
T09322
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mnj
Moraxella nasibovis
Brite
KEGG Orthology (KO) [BR:
mnj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnj03019
]
LU290_06055 (hrpA)
Enzymes [BR:
mnj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LU290_06055 (hrpA)
Messenger RNA biogenesis [BR:
mnj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LU290_06055 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
NACHT
nSTAND3
AAA_30
T2SSE
PhoH
SRP54
Peptidase_M55
AAA_23
DUF7792
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WFF37834
LinkDB
All DBs
Position
complement(1268553..1272746)
Genome browser
AA seq
1397 aa
AA seq
DB search
MNTKESMMKELAILAKDRHYLNRLRQEIKHAHGDEKVKKQARFDEIAERSAQAVIARQNA
IPSDLGEKLNPDLPVTKEAEVLIQAIKDHQVIIVAGETGSGKTTQLPKLAMLAGRGTTGQ
IGHTQPRRLAARSVASRIADELGERLGQTVSFKVRFTEEGGQHSIVKLMTDGILLAELGT
DRFLTRYDTIIIDEAHERSLNIDFILGYLKSLLPKREDLKVIITSATLDTERFANYFAKD
GVPAPVFSVEGRSYPVEVRYRPLTDQIISSHDDDAFDEAEDNLPRALTAAVAECFDDAAK
KGHPHQADILIFASTEAQIRELQDILTTHAPAHTEVLPLFARQSFAEQQRIFQPSGKGRR
IIIATNVAETALTVPNIRYVIDLGFARISRYNYRSRIQRLPIEAISQAAANQRKGRCGRI
GDGVCIRLYSEEDFNARPEFTEPEILRTNLASVILQMTRLNLGDVSAFDFITPPDFRLVN
DGKKLLLELGAITDAPTKTAIKKRKSTPTALTKIGQMMAKMPIDPRLARMLIAGDHFDCL
SDMLIIVSALAVQDVRERPSNKQMQADQKHALFRREHSDFLFYLELYQALFGTHELNDYQ
VLSSNARRNFAKKHYLSATRIREWQKTHEQLSGMMAELGFEIKKTDDKADNHQDDRSLVK
ADTKKGVRLSLNKTKATKNKSSLSLSALKAISTNGVVDQAAVQYANIHRALLTALLSFLA
HKTDALGEYLMARSQKARIFPASTLHKKGVDWLMAFEVVETSQVYMRCNAKIEPEWIVSA
AGDLLKYHYFEPHWSKKTGRVRAYMQISLFGLVVVAKELTNYEPVDIEHAREIFIRDALV
EGNYGFSAKFLTHNTAKIKDVERIEDKLRRRDLLVDEERLYQFYHEKIPSHIASRKAFEE
FYHEKASEDPNFLFFSDDDVLNEAVNANHEFPESWQMGGLKLPLSYVFDPSSDDDGVTVR
VPVKALSQIDAVALLWGIAGWRYELVLQLLKTLPKELRRQIVPIPDTTDKIFAKLSVNSG
VGLLDQLTDNLLRLGVRVSPNDFEPSKVDDYLRPLICVVDDKNHVIEKSRDLARLKSRHT
SVIRQEVMIEEGLHHQFPAHFNFVRNKHTSGVVMQEFSALKADKAGVAVSIAQFTELKSA
LHTHKNGILALIKSKLGAKQKQLTGQIDKAFKLAFAPLGDLEKLKAIVVDATLQACLYDH
APRFIDSSSEAARLHIGGLIDDETAWLVEHLPFDESEFAQTCQTVLAEFLLAGQAVLKTL
KDIYTSWQTARGKLLMLDGEIFGESIEDVEDQLDDLSLSDFIYRTDVAHWREYPRYLQAL
NVRLDRLTHNVDADLDGVYALDVHMERLANRVHDPKIAEYRWAVEEYRINLFAQPMKTKF
AISDKRLEKLWASLNTK
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaaagaatccatgatgaaagagttagccattttagccaaagatcgccactat
ttaaaccgacttcgccaagaaatcaaacacgctcacggcgatgaaaaagtcaaaaagcaa
gccagatttgatgagattgccgaacgctccgcccaagcagtcatcgccagacaaaacgcc
attcctagcgatcttggcgaaaagctcaatcctgacttgcccgtcaccaaagaagcggaa
gtcttaatacaagccatcaaagatcatcaagtcatcatcgtggcaggcgagacaggctca
ggtaagaccacgcagctacccaaacttgccatgctggcaggtcgtggtacgacagggcaa
atcggacatactcagccacgccgactggcggcacgctcggtggcaagtcgtatcgctgat
gagctgggcgagcgtttggggcagacggtgagctttaaggtgcgatttaccgaagaaggc
ggtcagcacagcattgtcaagctgatgacggatggtattttgcttgccgagttgggtacg
gatcggtttttgactcgctatgataccatcatcattgatgaggcacatgaacgcagtctg
aatattgattttattttgggttatttaaagagtctgctaccaaaacgagaagatttaaaa
gtcatcatcacctcggcaaccttagataccgagcgatttgccaattattttgccaaagat
ggcgtgcctgcccctgtatttagcgtggaggggcgcagctatcctgtggaggtgcgttat
cgtcctttgaccgatcagatcatcagcagtcacgatgacgatgcgtttgatgaggcagag
gataatttgccacgagcattgacggcggcagtggcagagtgttttgatgatgctgccaaa
aaaggacatccgcaccaagcggacattttgatttttgccagtacagaagcccaaatccgt
gaattacaagacatcttaaccacgcacgcacctgctcacaccgaagtgttaccgttgttt
gccagacaaagctttgctgagcagcagcggatttttcagccatcgggcaagggtcggcga
atcatcattgctaccaatgtcgccgagaccgctttgaccgtgccgaacattcgctatgtg
attgatttgggatttgctcgtatcagtcgttataattaccgctctcgcattcaaagactg
cccatcgaggcaatcagccaagctgccgccaatcagcgtaagggtcgctgtggtcgtatt
ggcgatggcgtgtgcattcgtctgtattctgaagaagattttaatgctcgtccagaattt
accgagcctgagattttgcgtaccaatctggcaagcgtcattttgcagatgacaaggcta
aatcttggcgatgtgtcggcatttgactttatcacgccgcctgattttcgtctggtgaat
gacggcaaaaaactgctacttgaacttggggcgatcacagacgcaccgaccaagactgcc
atcaaaaaacgcaaatcaacgcccaccgccttaaccaaaatcggtcagatgatggcaaaa
atgccgattgacccacgactggcaagaatgctcattgcaggcgatcattttgattgtttg
tctgacatgctcatcattgtctcggcacttgcggtacaagatgtgcgtgagcgtccaagc
aacaagcaaatgcaggctgatcaaaagcacgcattattccgccgtgagcattcggacttt
ttgttttatttggagctgtatcaggcgttgtttggcacacatgagttgaatgactatcaa
gtgctaagcagtaacgcacggcgaaattttgccaaaaagcattatctgagtgccactcgc
attcgtgaatggcaaaagacgcacgagcagttatcaggcatgatggcagagcttggtttt
gaaattaaaaaaaccgatgataaggcggacaatcatcaagatgaccgcagtttggtaaag
gctgataccaaaaaaggcgtgcgtctgtcgctgaataaaaccaaagcaaccaaaaacaaa
agcagtcttagtctgtctgctctaaaagccatcagcacaaacggcgtggtagatcaggcg
gcggtacaatatgccaacattcatcgagcgttattgacggcgttgctgtcttttttggca
cataagacggacgcactgggcgagtatttgatggcaagaagtcaaaaggctcgcattttt
cctgccagtactttgcataaaaagggcgtggattggttgatggcgtttgaagtggtggag
acttcgcaggtttatatgcggtgcaatgccaagattgagccagaatggattgtgtcggca
gcaggcgatttgttgaaataccattactttgaaccgcattggtcgaaaaaaacagggcgt
gtgcgtgcttatatgcaaatcagcttgtttgggctggtggtggttgccaaagagttgaca
aactatgagcctgtggacattgagcacgcacgagagatttttattcgtgatgcactggtg
gagggcaattatggattttctgccaagtttttgacgcataataccgccaaaatcaaagat
gtggagcgtatcgaagacaaacttcgtcgtcgggatttgcttgttgatgaagagcggttg
tatcagttttatcatgaaaaaatcccaagtcatatcgccagtcgcaaggcgtttgaagag
ttttatcacgaaaaagcgagcgaagatccgaatttcttgttttttagtgatgacgatgtt
ttaaatgaagcggtcaatgccaatcatgagtttcctgaaagttggcaaatgggcggtcta
aaattgccgttatcttatgtgtttgacccaagttctgatgacgatggcgttactgtgcgt
gtgccagtcaaggcgttgtcgcagattgatgcggtggcactgctttgggggattgcaggt
tggcgatatgagctggttttacaactgcttaaaaccttgccaaaagaattgcgccgtcag
attgtaccaattcctgatacgaccgataagatttttgctaagctgagcgtcaatagcggc
gtgggtttgcttgaccagctgacggataatttattaaggcttggcgtgcgtgtcagtccc
aatgattttgagccgtctaaggtagatgattatttgcgcccgctgatttgtgtggtagat
gacaaaaatcatgtgattgaaaaaagccgtgatttggcacgcctaaaatctcgccatacc
agtgtgattcgccaagaggtgatgatagaagagggcttgcaccatcagtttccagcacat
tttaactttgtccgtaacaagcacacatcaggcgtggtcatgcaagaattttccgcgtta
aaggcggataaggcaggcgtggcggtgtccatcgcccaatttaccgagctaaaatccgcc
ctacatacgcacaaaaacggcatacttgctttgatcaaatctaagctgggagctaagcaa
aaacagctcacaggacagattgacaaagcctttaaacttgcctttgcaccgcttggcgat
ttagaaaaactcaaagccattgttgttgatgccactttgcaggcgtgtttgtatgaccac
gcaccacgctttattgacagcagcagtgaagcggctcgcttgcacattggcggtctgatt
gatgatgaaaccgcttggctggtggagcatttgccttttgatgagagtgaatttgcccag
acttgccagacggtgttggcggagtttttgttggcagggcaggcggtattaaagacgctc
aaagacatctataccagctggcagacggctcgtggtaagctgctcatgcttgatggtgag
atttttggcgagagcattgaagatgtggaagatcagcttgatgatttgagcttgtcggac
tttatttatcgcacagatgtggcgcattggcgagaatacccccgttatttgcaagcactc
aatgttcgccttgatcgtctgacgcataatgtagatgccgatcttgatggcgtgtatgcg
cttgatgtgcatatggagcgacttgccaaccgtgtgcatgatccaaaaattgccgaatat
cgctgggcggtggaggaatatcgcatcaatctgtttgcacagccaatgaaaaccaaattt
gccatctcggacaaacgccttgaaaaactgtgggcaagcctaaatactaagtag
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