Moraxella nasibovis: LU290_06375
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Entry
LU290_06375 CDS
T09322
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mnj
Moraxella nasibovis
Pathway
mnj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LU290_06375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnj03019
]
LU290_06375
Enzymes [BR:
mnj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LU290_06375
Messenger RNA biogenesis [BR:
mnj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LU290_06375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
DUF7883
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WFF37892
LinkDB
All DBs
Position
1339486..1340748
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AA seq
420 aa
AA seq
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MDSNTQPTQKSSTFEHFSDLPLSEQTAKAVRALNFEKLTPIQAQILPHTLANQDAIGQAQ
TGTGKTATFLITIIESLLKRPFADDEQRFLGEPRALILAPTRELAQQIFADCRELTRFGN
LYNLCITGGADFDKQAKQLERRPLDILIGTPGRIIDWVNKGVLFLDRVEVFVLDEADRML
DMGFIPDIKRIVRHMPANTHRQSLLFSATFNTDVMNLAYRWLHNPTFVEIAPESKTNKAI
EQRFYLLTEREKMAALREILSGDEVKKTIVFANRKDQVKRLYDNLRRQFEVTMLSGDVAQ
QKRERYLQRFKDGEVNILVATDVAGRGIHVDDVTHVVNFTLPEIPDDYVHRIGRTGRAGH
TGVSISFVSENDAFNLPALEKHIDMKFKLSQFDFAKSESIAEQSSNQTDQSDFNENSASD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
ttggactcaaacactcagccaacccaaaaaagcagcacttttgaacatttcagcgacttg
cctttatccgagcagaccgccaaggcggtgcgtgcgctgaactttgaaaaactgaccccc
attcaggcgcagattttgccacatactttggcaaatcaagacgccatcggtcaggcgcag
acaggcacgggcaagacagcgacttttttgattaccatcattgagtctctattgaagcgt
ccttttgccgatgacgaacagcgatttttgggtgagcctcgtgcgctgattttagcaccg
actcgtgagctggctcagcagatttttgctgactgtcgtgagctgactcgctttggcaat
ctgtacaatctttgcatcactggtggcgctgactttgacaaacaagccaagcaactagaa
cgccgaccgctggacattttgatcggtacaccagggcgcatcattgactgggtaaataag
ggcgtgctgtttttggatcgtgtggaagtgttcgtgcttgatgaagcagaccgcatgttg
gacatgggctttatccctgatattaagcgtatcgtgcgccatatgcccgccaatacgcac
cgtcaaagcctgctgttttcagcgactttcaacaccgatgtgatgaatctggcgtatcgc
tggctgcacaatccgacctttgtggaaatcgccccagagagcaagaccaataaagccatc
gagcagcggttttatcttttgacagagcgtgaaaagatggcggcactcagagagattttg
tcaggcgatgaagtcaaaaaaaccatcgtttttgccaatcgcaaagaccaagtcaagcgt
ctgtatgacaatctacgccgtcagtttgaagttaccatgctctcaggcgatgtcgcccaa
caaaagcgtgagcggtatttacagcgttttaaagatggcgaggtgaatattttggtggcg
acagatgtggcggggcgtggcattcatgttgatgatgtgacgcatgtggtgaatttcacc
ctgccagagattcctgatgactatgtgcatcgcattgggcgcactgggcgagcaggtcat
actggcgtatccatcagttttgtcagcgaaaatgatgcctttaatctgccagcccttgaa
aagcacatcgacatgaaattcaaacttagccaatttgactttgccaagtctgaaagtatt
gcagaacaatcatcaaaccaaaccgaccagtcggattttaatgaaaattcggcgagcgac
tga
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