Moraxella nasibovis: LU290_09455
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Entry
LU290_09455 CDS
T09322
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mnj
Moraxella nasibovis
Pathway
mnj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LU290_09455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnj03019
]
LU290_09455
03009 Ribosome biogenesis [BR:
mnj03009
]
LU290_09455
Enzymes [BR:
mnj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
LU290_09455
Messenger RNA biogenesis [BR:
mnj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LU290_09455
Ribosome biogenesis [BR:
mnj03009
]
Prokaryotic type
rRNA processing factors
LU290_09455
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
WFF38461
LinkDB
All DBs
Position
1976790..1980470
Genome browser
AA seq
1226 aa
AA seq
DB search
MKRILINATHNEEIRVALCKDNHLYDFDLENRTREQKKANIYKGHITRVEPSLEAAFVEY
GSARQGFLPLREIAPEYLHGNAREDSIRQLLKEGDEVIVQVEKEERGNKGAALSTYISLA
GRYLVLMPNNAKAGGISRQISGKVREEMKQIIASLSIPKGMSVIVRTAGLGKGFDDLQND
LNHLLDIWTSIQDQNKKRPSPCLVHQEAGVVTRAVRDYLRDDISEVWIDSEHAYNEAANF
IAAVMPTQLDKLRKYTEYEPMFARFGIERQIETAYQREVRLPSGGSIVIDQTEAMVAIDI
NSSKSTKGSDVAETAYHTNLEAADEIARQLRLRDMGGLIVIDFIDMNDPRHQKDVEKRLI
DATRHDRARVQFAEISKFGLMEMSRQRLRPSLEESTGYICPRCHGNGMIRDLRSLALSIM
RQIEQIALKERMGEIQAEVPTEIAAFLLNEKRESLVYLEQDSGTRITILPHAHLESPNFS
LHFNPDGFAPSSYERIVNAEEEEMGDRGYDVNWHTENEQPESINKDAPNRWQKANSAEQK
HEKAQDKPVNTAKAEPQVAAWLSNLFAPKPQAKLAGALDNSSAAAAIESIVNAGGVSLGA
SGVANLVQNTETKTDNKKAKEERPAAKPERESRDEHQERRHKNKKAKKESVEEVKEKTDK
KAKKEEPTHQKREAGSQRAPRGEVVRGAPLTNDHAKADKKPDETTHKKADKERARPSNPN
EVVVSVTPIAKEEVTSQTVHISLDGSKTAKPDNADTKVDDHVNNVDADSINIDGADVDGV
DVNETNKTATKGKSDDANASNKPSNDKAADASDAQNAKPQSETEEPSLAAQSDAPSAPAI
LHEATDDQNDITDAPQEQTAAQADESADIAKTDEAANDASDINVPLSSLLSPTIAPSAQI
IELARQENRAVNDPRVVMQAQSTQPVIRGTAREFIELMLGDTQRGDFIQDFINACAKNQA
PSANLDFANYGHAPLSDAYLRVFDRHTSVTARISAPQGKTAAPALRTTERAINDPRGPRS
DLPTDEQNAQAGKAESVAEQALAAQTADHTADASAATDVATNADTKDVAVPTETLTTQNT
KEPQSTSADSDSSETLIEQIKDGLESAIDAISDTVNELFGDDDSADVIDTDEPAKSEHKT
AKASSDKKTAKRTNSYKDMIENVAGQLLPQVGILNLAQPKPAKTRIKKTAGKSDNKPKSE
VRKAGAKVVKNKTEKADKALDDSATE
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcattttaatcaacgccacgcacaacgaagaaattcgtgtcgcactgtgcaaa
gacaatcatctgtatgattttgacctagaaaatcgtactcgtgagcaaaaaaaagccaac
atctacaaaggtcacatcacccgagttgagccgtcattggaagcagcatttgtagaatat
ggctctgctcgccaaggctttctacccctgcgagaaatcgccccagaatacctacacggc
aacgcccgtgaagacagcattcgccagcttttaaaagaaggcgatgaagtcatcgtccaa
gtagaaaaagaagaacggggcaacaaaggcgccgccctttctacctacatctcgctggca
ggtcgctatctggtactgatgccaaacaacgctaaggcaggcggtatcagccgtcaaatc
tcaggcaaagtccgtgaagagatgaaacaaatcatcgcaagcctatccatcccaaaaggc
atgagcgtcatcgtgcgcaccgcagggcttggcaagggctttgacgacctacaaaacgac
ctaaatcatctgctagacatctggacatccatccaagaccaaaacaaaaaacgcccaagc
ccatgcctggttcatcaagaagcaggtgtggtgactcgtgcggtgcgtgattatctgcgt
gatgacatcagcgaggtctggattgactcagaacacgcctacaacgaagcggcaaacttc
atcgctgccgtcatgccaactcagcttgataaactgcgtaaatacaccgaatacgagcca
atgttcgctcgctttggcattgaacgccaaattgagaccgcctatcagcgtgaagtgcgt
ctgccatcaggtggctctatcgtcattgaccagaccgaagcgatggtcgccattgacatc
aactcatcaaaatccaccaaaggctcagatgtcgctgagaccgcttatcacaccaaccta
gaagccgctgacgaaatcgctcgccagctacgcctaagagacatgggcggtctgattgtc
attgacttcattgacatgaacgacccacgccaccaaaaagatgtagaaaaacgcttgatt
gacgccactcgccacgaccgagcccgcgtgcagtttgccgagatttctaaattcggcttg
atggagatgagccgtcagcgtctgcgtccaagtcttgaagaatccacaggctacatctgc
ccacgctgtcatggcaacggcatgattcgtgatttgcgttcgcttgccctgtctatcatg
cgccaaattgaacaaatcgccctaaaagaacgcatgggcgagattcaagcagaagtaccg
accgaaatcgcggcgttccttttgaacgaaaaacgagaaagtctggtttatttagagcaa
gactctggcactcgcattaccatcttgccgcacgctcatttagaatctccgaattttagc
ttgcatttcaacccagatggctttgcgccgtccagctacgaacgcattgtcaatgccgaa
gaagaggaaatgggcgatcgtggctatgatgtgaattggcacaccgaaaacgagcagcct
gagagcatcaacaaagatgcgccaaaccgctggcaaaaagccaattcagccgagcaaaag
catgaaaaagcgcaagacaagccagtgaataccgccaaagctgagccacaagttgccgct
tggctgtccaacctatttgccccaaaaccacaggcaaaattggcaggcgctttggacaat
tcaagtgccgccgccgccattgaatccattgtcaatgcaggtggcgtaagtcttggtgca
agtggcgtggcaaacttggttcaaaacaccgaaaccaaaaccgacaacaaaaaagccaaa
gaagaacgcccagccgccaagcctgagcgtgaatctcgtgacgaacatcaagaacgccgt
cacaaaaacaaaaaggcgaaaaaagaatccgttgaagaagtgaaagaaaaaacggacaaa
aaagccaaaaaagaagaaccaacccaccaaaaacgagaagcaggctcacagcgagcgcct
cgtggtgaagtcgtgcgtggtgcgccattgaccaatgatcacgccaaagccgacaaaaag
ccagacgagacgacgcacaaaaaagccgacaaagagcgtgctcgtccaagcaatccaaat
gaagtcgtcgtcagcgtcacgccaatcgccaaagaagaagtgaccagccagacggtgcac
atttcgctagacggcagcaagaccgccaagcctgacaatgccgatacaaaagtcgatgac
catgtcaataatgtcgatgccgatagtatcaatattgatggtgccgatgttgatggtgtc
gatgtcaatgaaaccaacaagacggcaacgaaaggcaagtcagacgacgccaacgccagc
aacaaacctagcaatgacaaagcagctgatgcgtcagacgcacaaaatgccaagcctcag
agcgagactgaagagccatcgttagccgcccaaagtgacgctccaagtgcgcctgccatc
ttgcatgaagccactgacgaccaaaacgacatcaccgatgcgccacaagagcagacagca
gcgcaggctgatgagtcagcagacatcgctaagaccgatgaggcggcaaacgacgccagc
gacatcaatgtgccattgtctagcctactaagcccaacgattgcgccaagcgctcaaatc
attgagcttgcccgccaagaaaatcgagcggtgaacgaccctcgtgtcgtcatgcaggcg
caaagcacgcagcctgtcattcgtggtacggctcgtgagttcattgagctgatgctgggc
gatactcagcgtggtgatttcattcaggacttcatcaatgcctgcgccaaaaatcaagca
ccaagtgccaacttggattttgccaactacggtcatgcgccgcttagcgatgcctattta
agagtgtttgacagacacaccagcgtcacggcacgcatcagcgccccacagggcaagacg
gccgcccctgctttgcgcaccactgagcgtgccatcaatgaccctcgtggtccacgctct
gatctgccgaccgatgagcaaaacgctcaggcgggcaaggcggagtcggtagcagaacaa
gctttggcagcacagacagccgatcacactgccgatgccagtgccgccaccgatgttgct
acaaatgctgacaccaaagatgtcgccgtgccaacagagactttgacgactcaaaacaca
aaagagcctcaaagtaccagtgcagacagcgactcgagcgagacgctcattgagcagatc
aaagatggtctagaatccgccatcgatgccatcagcgacacagttaatgagctgtttggc
gatgacgatagcgcagatgtcatcgataccgatgagcctgccaagagcgaacataagacc
gccaaagcaagcagcgacaaaaagaccgctaagcgcaccaacagctacaaagacatgatt
gaaaatgtcgcaggtcagctgttgccgcaggtgggcatcttaaatctggctcagccaaaa
cctgccaagacacgcatcaaaaaaaccgcaggaaaaagcgataacaagccaaaatccgaa
gtgcgtaaagcaggtgcaaaagtggtaaaaaacaaaaccgaaaaagcagacaaggctttg
gacgattcagccactgaataa
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