Marinobacter nanhaiticus: RE428_06410
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Entry
RE428_06410 CDS
T10288
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mnk Marinobacter nanhaiticus
Pathway
mnk00300
Lysine biosynthesis
mnk00470
D-Amino acid metabolism
mnk01100
Metabolic pathways
mnk01110
Biosynthesis of secondary metabolites
mnk01120
Microbial metabolism in diverse environments
mnk01230
Biosynthesis of amino acids
Module
mnk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RE428_06410 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RE428_06410 (dapF)
Enzymes [BR:
mnk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RE428_06410 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Draxin
Motif
Other DBs
NCBI-ProteinID:
BES69623
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All DBs
Position
719543..720466
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AA seq
307 aa
AA seq
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MTDARRRGGGMLQFTKMHGLGNDFMVVDAISQPFRLRPDFISRLADRHFGIGFDQLLVVE
PPGLPDVDFRYRIFNADGSEVEQCGNGARCFARFVRDQRLTNKKVIRVQTAGGVIELRAG
KEGWVTVNMGVPELEPSKIPFQADERADTYTLEVAEHTVVFSAVSMGNPHAVLVVDNVDT
APVEQLGPLLEVHPAFPKKANIGFLQIVDRQNARLRVFERGSGETLACGSGACAAMVAGR
LRGLLDEKARIELRGGPLSLEWQGEGAPVMMEGPTARVFEGQVRVPGEAPRRARSGRGSG
RQRQKKS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgccagacgccggggcggcggcatgctccagttcaccaagatgcacggtctg
ggcaacgacttcatggtggtcgatgccattagccagcccttccgcctgcgcccggatttc
atcagcaggctggcggaccgccatttcggtatcggtttcgaccagttgctcgtggtggag
ccgcctggcctcccggacgtggacttccgctaccgcatcttcaatgccgacggctccgaa
gtggagcagtgcggcaacggcgcccgctgttttgcccggttcgtacgcgaccagcgactg
accaacaagaaggttatccgggtccagactgctggcggcgtgatcgaattgcgcgccggc
aaggaggggtgggtgacggtgaacatgggtgtgccagagctggaaccgtcgaagattccc
ttccaggctgatgagcgtgccgatacctacacccttgaggtcgccgaacataccgtcgta
ttttccgccgtttccatgggcaatccccatgcagtgctcgtggttgataacgtggacacc
gcacccgtggaacagctggggcccttgctggaggtgcatccagcgtttccgaaaaaagcc
aacatcggtttcctgcaaatcgtcgatcggcagaatgcgcgcttgcgggttttcgaacga
ggctccggtgaaaccctggcctgcggcagcggtgcctgcgcggcaatggtggccggaagg
ctgcggggactgctggacgagaaggcgcgaatagagctgcggggtgggcctctcagcctt
gaatggcagggggaaggggcccctgttatgatggaaggaccgaccgcccgagtgttcgaa
ggtcaggttcgtgtgccgggagaagcgccccgccgtgcccgttccggacgtgggtcgggt
cgtcagagacagaaaaagagctag
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