KEGG   Marinobacter nanhaiticus: RE428_06410
Entry
RE428_06410       CDS       T10288                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
mnk  Marinobacter nanhaiticus
Pathway
mnk00300  Lysine biosynthesis
mnk00470  D-Amino acid metabolism
mnk01100  Metabolic pathways
mnk01110  Biosynthesis of secondary metabolites
mnk01120  Microbial metabolism in diverse environments
mnk01230  Biosynthesis of amino acids
Module
mnk_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:mnk00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RE428_06410 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RE428_06410 (dapF)
Enzymes [BR:mnk01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     RE428_06410 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF Draxin
Other DBs
NCBI-ProteinID: BES69623
LinkDB
Position
719543..720466
AA seq 307 aa
MTDARRRGGGMLQFTKMHGLGNDFMVVDAISQPFRLRPDFISRLADRHFGIGFDQLLVVE
PPGLPDVDFRYRIFNADGSEVEQCGNGARCFARFVRDQRLTNKKVIRVQTAGGVIELRAG
KEGWVTVNMGVPELEPSKIPFQADERADTYTLEVAEHTVVFSAVSMGNPHAVLVVDNVDT
APVEQLGPLLEVHPAFPKKANIGFLQIVDRQNARLRVFERGSGETLACGSGACAAMVAGR
LRGLLDEKARIELRGGPLSLEWQGEGAPVMMEGPTARVFEGQVRVPGEAPRRARSGRGSG
RQRQKKS
NT seq 924 nt   +upstreamnt  +downstreamnt
atgaccgatgccagacgccggggcggcggcatgctccagttcaccaagatgcacggtctg
ggcaacgacttcatggtggtcgatgccattagccagcccttccgcctgcgcccggatttc
atcagcaggctggcggaccgccatttcggtatcggtttcgaccagttgctcgtggtggag
ccgcctggcctcccggacgtggacttccgctaccgcatcttcaatgccgacggctccgaa
gtggagcagtgcggcaacggcgcccgctgttttgcccggttcgtacgcgaccagcgactg
accaacaagaaggttatccgggtccagactgctggcggcgtgatcgaattgcgcgccggc
aaggaggggtgggtgacggtgaacatgggtgtgccagagctggaaccgtcgaagattccc
ttccaggctgatgagcgtgccgatacctacacccttgaggtcgccgaacataccgtcgta
ttttccgccgtttccatgggcaatccccatgcagtgctcgtggttgataacgtggacacc
gcacccgtggaacagctggggcccttgctggaggtgcatccagcgtttccgaaaaaagcc
aacatcggtttcctgcaaatcgtcgatcggcagaatgcgcgcttgcgggttttcgaacga
ggctccggtgaaaccctggcctgcggcagcggtgcctgcgcggcaatggtggccggaagg
ctgcggggactgctggacgagaaggcgcgaatagagctgcggggtgggcctctcagcctt
gaatggcagggggaaggggcccctgttatgatggaaggaccgaccgcccgagtgttcgaa
ggtcaggttcgtgtgccgggagaagcgccccgccgtgcccgttccggacgtgggtcgggt
cgtcagagacagaaaaagagctag

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