Marinobacter nanhaiticus: RE428_06910
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Entry
RE428_06910 CDS
T10288
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mnk Marinobacter nanhaiticus
Pathway
mnk03030
DNA replication
mnk03410
Base excision repair
mnk03420
Nucleotide excision repair
mnk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RE428_06910 (polA)
03410 Base excision repair
RE428_06910 (polA)
03420 Nucleotide excision repair
RE428_06910 (polA)
03440 Homologous recombination
RE428_06910 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnk03032
]
RE428_06910 (polA)
03400 DNA repair and recombination proteins [BR:
mnk03400
]
RE428_06910 (polA)
Enzymes [BR:
mnk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RE428_06910 (polA)
DNA replication proteins [BR:
mnk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RE428_06910 (polA)
DNA repair and recombination proteins [BR:
mnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RE428_06910 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RE428_06910 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BES69673
LinkDB
All DBs
Position
complement(774250..776970)
Genome browser
AA seq
906 aa
AA seq
DB search
MSQTQTPPVVLVDGSSYLFRAFHALPPLTTSKGQPTGAIKGVISMIRRLDQDFPGSKVVV
VFDAKGKTFRHELYEEYKAHRPPMPEDLATQIAPIHEIIRAMGLPLLIVPNVEADDVIGT
LACEATAKGVDVVISTGDKDMAQLVSDHVTLVNTMTETTMDREGVKEKFGIGPEQIVDYL
ALVGDKVDNIPGVEKCGPKTAVKWLQSYENLDKLVEHADEIKGKIGDNLRAASEILPLSR
ELATIKVDVELEFGITDVQPDEPDREKLLAMFKELEFKTWVDELSRQEGVVDVSSEESTP
ETPEKHYSTVTDKAEFDEWVERLKKADIFAFDTETTSLNYSTAEVVGVSFAIEPGEAAYV
PFGHDYMGAPEQLEPNYVLGQLKPLLEDSSQKKVGQNLKYDKNVLANHGISLEGITEDTM
LESYVLNSTASRHDMDSLALKYLGEATISFESIAGKGAKQLTFNQISLEQAGPYAAEDAD
ITLRLHRTLRPKLAAEPKLDSVYQNIDLPLVPVLSHMEQRGVMLDSATLRRHSQELAIRM
AELEQAAHEEAGEPFNLGSPKQLQAIFYEKLGLPVIKKTPKGAPSTAEPVLQELAHEYKL
PHLILEHRSLSKLKSTYTDRLPEMVSPRTGRVHTSYHQAVAATGRLSSSEPNLQNIPIRT
EEGRRIRQAFIAPEGYKLVAADYSQIELRIMAHLSGDKSLLKAFAEGKDIHRATAAEVFD
TPVEDVTGEQRRSAKAINFGLIYGMSAFGLSRQLGVERKVAQEYIDLYFHRYPGVADYMD
NIRKLAHDQGYVETLFGRRLYLPEINARNKQMQQAAERTAINAPMQGTAADIIKRAMVTV
ENWLLDSHAEEARMVMQVHDELILEVKESAIDKVIAGLTERMSKAAELDVPLLVEAGVGD
NWDEAH
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagacacagacgccaccggtagttctcgtcgacggatcgtcctacctgtttcgc
gcctttcacgccctgcccccgctgacgaccagcaaaggacagccgaccggcgcgataaag
ggtgtgatcagcatgatccggcgtctcgaccaggacttcccgggctcgaaggtcgtcgta
gtgttcgatgccaagggcaagaccttccgccacgaactctacgaggaatacaaggcccac
cggcccccgatgcccgaagacctggccacccagatcgcgccgatccacgagattatccgc
gccatggggctgcccctgttgatcgtacccaacgtcgaggccgatgacgttatcggcact
ctagcctgcgaggcgaccgccaaaggcgtggacgtggtgatttccaccggcgacaaggat
atggctcagctggtcagcgatcatgtgacgttggtcaataccatgaccgaaaccaccatg
gaccgcgagggcgtgaaggagaagttcggtattgggcccgagcagatcgtcgattacctc
gccctcgtgggcgacaaggtggacaacattcccggggtggagaaatgcgggccgaaaact
gcagtgaagtggctgcagtcctacgaaaacctggacaagctggttgaacacgccgacgag
atcaagggcaagatcggcgacaacctgcgtgccgccagtgaaatcctgccgctcagccgc
gaattggctaccatcaaggtcgacgtcgagttggagttcggtattaccgacgtacagccg
gacgagcccgaccgggaaaaactgctggccatgttcaaggagctggaattcaagacctgg
gtggacgagctcagccgccaggaaggcgtcgtcgatgtttccagcgaggagtcgacgccc
gagacgccggaaaagcattattcgacagtgaccgataaagcggagttcgacgagtgggtc
gagcgcctgaagaaagccgatattttcgccttcgataccgagaccaccagccttaactac
tccacggccgaagtcgtgggtgtctccttcgccattgagcccggcgaagcggcttacgtc
ccatttggccacgattacatgggtgcccctgaacaactggagccaaactacgtactcggc
cagcttaaacccctgctggaagattccagccagaaaaaggtcggccagaacctcaagtac
gacaagaacgtactcgccaaccacggcatttccctggaggggatcacggaagatacgatg
ctggagtcctacgtactgaactccacggcatcacgccatgatatggacagtcttgccctg
aaatacctgggcgaggccacgatttcgttcgaatccatcgccggcaagggtgccaagcag
ctcaccttcaaccagatttccctggagcaggctggcccctatgccgctgaagatgcagat
atcaccctgcgtctgcatcgcaccctgcgtccgaaactggctgccgagcccaaactcgat
tcggtctaccagaacattgacttgcccttggtaccggtgctgtcgcatatggagcagcgc
ggcgtgatgctggacagcgccaccctccggcgccatagtcaggaattggccatacgcatg
gcagagctggagcaggccgcccacgaagaggccggcgagcctttcaacctgggatcgccc
aaacagttgcaggccatcttctatgagaagcttggtttgccggtaatcaagaaaaccccg
aaaggcgcaccttccactgcggaaccggtactgcaggaactggctcacgagtacaaactg
ccgcacctgatcctggaacaccgcagtctgagcaagctcaaatccacctataccgatcgg
ctgccggagatggtcagcccccgaacaggccgcgtccatacgtcctaccaccaggcagta
gccgcgacaggtcgcctgtcatcttccgaacccaacctgcagaacattcccatccgaacg
gaagaagggcggcgcatccgccaggcctttatcgcaccggaaggctacaagctggttgcg
gcggactattcccagatcgaactgcgcatcatggcccacttgtccggcgacaagagtctg
ctcaaggccttcgccgagggcaaggacatccatcgcgccaccgccgccgaagtattcgac
acgcctgtggaagatgtcaccggcgagcagcgccgtagtgcaaaggcaatcaactttggt
ctgatctacggcatgtccgccttcggcctgtcccgtcaactcggcgtcgaacgcaaggta
gcgcaggagtatatcgatctgtacttccaccgctatccgggcgtcgccgactacatggac
aacatccgcaaactggcccacgaccaggggtatgtggaaaccctgttcggtcgccgcctc
tatttgccggagatcaacgcgcgcaacaagcagatgcaacaggccgccgagcgcaccgcc
atcaacgcccccatgcaggggaccgctgcggacatcatcaagcgggcgatggtcaccgta
gagaattggctgctggacagtcacgctgaagaggcccgcatggtcatgcaggtgcacgac
gaactgatcctggaggtgaaggaatccgctatcgacaaggtgatcgccggattgaccgag
cgtatgtccaaggctgcggaactggatgtcccgctgttagtcgaggcgggtgtcggggac
aactgggacgaggcgcattaa
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