Marinobacter nanhaiticus: RE428_08170
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Entry
RE428_08170 CDS
T10288
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mnk Marinobacter nanhaiticus
Pathway
mnk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RE428_08170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnk03019
]
RE428_08170
Enzymes [BR:
mnk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RE428_08170
Messenger RNA biogenesis [BR:
mnk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RE428_08170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
BES69799
LinkDB
All DBs
Position
complement(887678..889015)
Genome browser
AA seq
445 aa
AA seq
DB search
MSFMPGKGQKKQPPTYQRQVIPRDQHTVSRSLISDNAKKVLSRLNGAGFEAYMVGGGVRD
ILLDGRPKDFDVATNATPEEVRDLFRNSRLIGRRFRIVHVLFGREVIEVTTFRGNTAEAD
EDSEDDRRASEHGLLLRDNVYGTMEEDALRRDFTVNALYYNLQDFSVIDFTGGVDDLRAR
RLTMIGDAETRYREDPVRMLRAIRFAAKLDFDLAPDTAAPIRELAPLLTHVPAARLFDEV
LKLFCAGFGATTYDLLQEYHLFAALFPATAAALEQGESDEVIRQALENTDQRIRQGKSVT
PYFLYAALMWPALQAEWKRRQNAGEPVQPALHQSIAQVIGQQVQATAIPRRFSGPMKEIW
ELQMRLPRRNGKRAFVTLEHPRFRAAYDFLLVREAAGEDTEDLGPWWTDFQQADEKGREK
MLNELGPTGPRNRRRKRRKKPQPKA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttatgcctgggaaaggccaaaaaaaacaaccacccacctaccaacgccaggtc
attccccgcgaccagcataccgtctctcgttcgctgatcagcgataacgccaagaaggta
cttagccggctgaatggcgcgggcttcgaagcctacatggtaggcggcggcgttcgggat
atcctgctcgacgggcggcccaaggatttcgatgtggcgaccaatgccacaccggaagaa
gtgcgcgacctgttccgcaactcgcgcctgatcggtcgccgcttccgcatcgtgcacgtc
ctgtttggccgcgaggtcattgaggtcaccaccttccgcggcaataccgccgaagcggac
gaggactccgaggacgatcgtcgcgcaagcgaacacggcctactcctgcgggacaatgtc
tacggcaccatggaagaggatgccctacgtcgcgacttcaccgtcaacgcgctctactat
aacctgcaggatttcagcgtcatcgacttcaccggcggggtggacgatctacgtgcccgt
cgactgacgatgatcggcgacgccgaaacccgctaccgtgaagacccggtgcgcatgctg
cgggcgatccgttttgccgccaagctcgacttcgacctggcaccggataccgccgctccg
atccgcgaactggcacccttgctgacacacgtgccagcggcacgcctgttcgacgaggtg
ctcaagctgttctgtgccggattcggcgccacaacctacgaccttttacaggaatatcat
ctatttgcggcgctattccccgcgactgcggccgcactggagcagggcgagtccgacgag
gtaatccgacaggcgctggaaaacaccgaccagcgcatccgccaaggcaagtcggtaacc
ccttatttcctgtatgccgcgctaatgtggccagcccttcaagccgaatggaaacgccgc
cagaacgctggtgaaccggtccagcccgctctgcaccagtccattgcccaggtgattggc
cagcaggtccaggccaccgccatcccccgccgtttctcaggcccgatgaaggagatctgg
gaactgcagatgcgcctgccccgtcgcaacggcaagcgcgctttcgtcaccctggagcat
ccgcgtttccgcgccgcctatgatttcctgctagtacgcgaagcggccggtgaagatact
gaagacctcggcccatggtggaccgatttccagcaggcggacgaaaagggacgggagaag
atgctcaacgagctcggccccaccggcccccgcaaccggcgccgcaagcgccgtaagaag
ccgcaaccgaaggcatag
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