Marinobacter nanhaiticus: RE428_16520
Help
Entry
RE428_16520 CDS
T10288
Symbol
atuF
Name
(GenBank) geranyl-CoA carboxylase subunit apha
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
mnk Marinobacter nanhaiticus
Pathway
mnk00907
Pinene, camphor and geraniol degradation
mnk01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RE428_16520 (atuF)
Enzymes [BR:
mnk01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
RE428_16520 (atuF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
ATP-grasp_3
BT_MCC_alpha
HlyD_3
RimK
LAL_C2
Motif
Other DBs
NCBI-ProteinID:
BES70634
LinkDB
All DBs
Position
complement(1796293..1798266)
Genome browser
AA seq
657 aa
AA seq
DB search
MLNKILIANRGEIAVRIMRTAHALGYRTVAVYSDADKDALHVHTAEEAVCIGPATVNASY
LNIEAILEAAKRTGADAIHPGYGFLSENAAFASTCVDAGLVFIGPPAEAIELMGSKRRSK
IAMQEAGVPVVPGFEQANASDEALQDAAEKMGFPAMIKASAGGGGRGMRLVREAAQLPDQ
IQRARSEAKNAFGDDELILEKAVIEPRHIEVQVFADRHGNVIHLGERDCSIQRRHQKVVE
EAPSPFMTPALREAMGDAAVKAAKACDYVGAGTVEFLVDKDRNFYFLEMNTRLQVEHPVT
ELVTGQDLVQWQIRVAEGETLPLTQDDIRLTGHAVEVRLYAEDPATDFMPQTGTLFDYSP
AELPGLRYDSGVRTGDAISPFYDPMLAKVIAYGETRTEAIRRLKRALEDTRVFGVTTNRG
FLSRIMAHPCFIAGEATTAFLDNDFADDPSMQTGRASLKELGLAALLLSYDDVSTSRWSN
SLPTPLPLRLAVDDQYHDVRLLWDRQRLTIADGDSSATLEVTSLGEHELDYIDNGVRQRC
QYQRCGDRLYLQQLSRAFCVRDVTHAPVSMLDGGASDRVLASMDGAIIDVRAEPGQNVQR
GDTLVVLEAMKMEHPLVAERDGIVETVHVTTGTQVKRRQLLVALSGEETPSNEGASA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacaagattctgattgccaaccggggcgagatcgcagtccgcatcatgcgcaca
gcccacgccctgggctatcgcactgtggcggtatacagcgatgccgataaagatgccttg
catgtccataccgccgaagaagccgtctgtatcgggcctgctacggtcaacgcctcctac
ctgaacatcgaagctatcctcgaggcggccaaacgcacaggcgcggatgccatccacccc
ggctatggcttcctgtcggaaaacgccgcctttgcaagcacctgcgtcgatgccgggctg
gtctttatcgggccacctgccgaggccatcgagctgatgggcagcaagcgaagatcgaag
atcgctatgcaggaagcgggggtgcccgttgtacccggctttgagcaggccaatgcttcc
gacgaagcattgcaggacgccgcggaaaaaatgggctttccggcgatgatcaaggcctcc
gcaggcggcggtggccgcggcatgcggctcgtccgtgaggccgcccagctaccagaccag
atccagcgtgcccgctcggaagcgaagaatgccttcggcgacgatgagctgatccttgag
aaggcggtcatcgagcctcgccatatcgaggttcaggtctttgctgaccgtcacggtaac
gtgatccacctgggcgagcgtgactgttcgatccagcgccggcaccagaaggtggtagag
gaggccccttctccattcatgacgccggcgttgagggaagccatgggcgacgccgcggtc
aaggcggccaaggcctgcgactacgttggcgcgggcactgtcgaattcctcgtggacaaa
gaccgcaacttctatttcctggagatgaacacccgactgcaagtcgagcacccggtgact
gagctggtaacgggacaggacctggtccaatggcagatccgcgtggccgaaggcgaaacg
ctccccctgacccaggatgatatccggttgaccggtcatgccgtggaagtgcggctctac
gccgaggatcccgccaccgactttatgccgcagactggcacgctgttcgactattcaccg
gcagaattgccggggctgcgctacgacagcggcgtacgtaccggcgatgccatctcgccg
ttctacgatccgatgctggcgaaagtgattgcctatggcgagacccgcaccgaggccatt
cgccgcctgaaacgggccctggaagatacccgcgtatttggcgtgaccaccaaccggggt
ttcctcagccggattatggcccatccatgcttcatcgccggcgaggctacaaccgcgttc
ctcgataatgatttcgccgacgatccgtcaatgcagaccggtcgcgcatcactaaaagag
ctggggttggcagctctgctgctcagttacgacgacgtctccaccagccgctggagcaat
agcctgccaacgcccttgccgctgcgcctggcggtcgacgatcaatatcacgacgttcgc
ttattatgggaccggcaaagactcacgattgccgacggtgactcgtccgctacgcttgag
gtgacctcgctgggggagcacgagctggactatatagacaacggcgttcgtcagcgttgc
caatatcagcgttgtggcgatcgcctatatttgcagcagctcagccgggctttttgtgtt
cgggacgtaacccatgctccggtttcaatgctggacggcggagcctcagaccgcgtattg
gcctccatggacggcgctattatcgatgtgcgtgccgagccgggtcagaacgtgcaacgg
ggtgatacgctggtagtgctggaagccatgaagatggaacacccgctggttgccgagcgt
gacggcatcgtcgaaacggtccatgtcaccacaggcactcaggtcaaacgtcggcagttg
ctggttgcgctatccggcgaggaaacaccatccaatgaaggagcatcggcatga
DBGET
integrated database retrieval system
