Marinobacter nanhaiticus: RE428_17330
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Entry
RE428_17330 CDS
T10288
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mnk Marinobacter nanhaiticus
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mnk03009
]
RE428_17330 (rimO)
Enzymes [BR:
mnk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RE428_17330 (rimO)
Ribosome biogenesis [BR:
mnk03009
]
Prokaryotic type
ribosomal protein modification factors
RE428_17330 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
RNase_II_C_S1
TRAM
YajR_YAM
Matrix_Paramyxo_N
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BES70715
LinkDB
All DBs
Position
1887978..1889321
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AA seq
447 aa
AA seq
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MSDSQGVAANGGKVGFISLGCPKALVDSERILTQLRMDGYEVVPTYNDADVVVVNTCGFI
DAAKQESLDAIGEALQENGKVIVTGCMGVEADRIREAHPKVLAVTGPQAYEEVVGAVHEY
VPSQKTHDPFVDLVPPQGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGGVM
DEAQRLVKAGVKELLVISQDTSAYGVDVKFRTGFWQGRPLKTRMQELCEALSSLGVWVRL
HYVYPYPHVDNVIPLMAEGKILPYLDIPFQHASPRVLKAMKRPAHDSKTLERIRTWREIC
PELTIRSTFIVGFPGETEEDFQYLLDWLDEAQLDRVGAFKYSPVEGAKANEIEGAVPEEV
KEERLARFMAKQAEISAARLQRKIGMEIDVLIDEVDEEGAIGRSKADAPEIDGMVYLNDE
TGLAPGQIVRARVTHADEHDLWADLIA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatagtcagggcgtcgctgcaaacggtggcaaggtcggtttcatcagcctgggt
tgccccaaggctctggttgattcagaacggatcctgacccaactgcgtatggacggttac
gaggtggtaccgacctacaacgatgcggatgtcgtggtggtcaacacctgcggttttatc
gatgcggccaagcaggaatccctggatgccattggcgaggcgttacaggaaaacggcaag
gtcatcgtgacggggtgtatgggcgtcgaggcggatcgtattcgtgaggctcacccgaag
gtgctcgctgtgaccgggcctcaggcctatgaagaagtggtcggtgcggtgcatgagtac
gtgcccagccagaaaacccacgatccctttgtcgacctcgttccaccgcagggcatcaag
ttgacgccgcgtcattatgcctacctgaagatttccgagggctgcaatcaccgctgtacc
ttttgcattattccctccatgcgcggcgacctggtgagccggccggtggggggcgtgatg
gatgaggcccagcgactggtcaaggcgggtgtgaaagagttgctggttatctctcaggac
acgagcgcgtacggtgtggacgtgaagttccgtaccggcttctggcagggccgtccgctc
aagacccggatgcaggagctgtgcgaagccctgagctcactgggtgtctgggtgcggctg
cactacgtctatccgtacccgcacgtggataacgtgatcccgctgatggccgaaggcaag
atcttgccgtacctggatatcccgttccagcacgccagtccgcgtgtactcaaggccatg
aagcgtccggcgcacgacagcaagacactggaacgtatccgcacctggcgcgagatctgt
ccggaactgactatccgttccacctttatcgtgggattcccaggcgagaccgaagaagat
tttcagtacctgctggattggctggacgaagcccagctggatcgcgttggcgcgttcaag
tacagcccggttgaaggtgccaaggcaaacgagattgagggtgctgtgccggaagaggtc
aaggaggagcgtcttgcccgattcatggccaaacaggctgagatcagcgccgcccgtttg
cagcgcaagatcggaatggaaatcgacgtgctaatcgatgaagtggatgaggagggcgca
atcggccgcagcaaggcggatgcgccggagatcgacggcatggtttatctgaacgatgag
actggcctggcgccgggtcaaatcgttcgggcgcgtgtgacccatgctgatgagcatgat
ctttgggcggatttgattgcctga
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integrated database retrieval system
