Marinobacter nanhaiticus: RE428_20430
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Entry
RE428_20430 CDS
T10288
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
mnk Marinobacter nanhaiticus
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnk03032
]
RE428_20430 (hupB)
03036 Chromosome and associated proteins [BR:
mnk03036
]
RE428_20430 (hupB)
03400 DNA repair and recombination proteins [BR:
mnk03400
]
RE428_20430 (hupB)
DNA replication proteins [BR:
mnk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RE428_20430 (hupB)
Chromosome and associated proteins [BR:
mnk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RE428_20430 (hupB)
DNA repair and recombination proteins [BR:
mnk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RE428_20430 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
BES71025
LinkDB
All DBs
Position
2242690..2242962
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAESADISKAGAGRALDAMVASITDALKKGDQVTLIGFGTFSVKERAARTG
RNPQTGAEIKIPASKVPGFKAGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtccgaacttatcgatgcaatcgcagagtcagcagatatttccaaggccggt
gcaggacgtgccctggatgctatggttgcctctatcaccgacgcactgaaaaaaggtgat
caggttaccctgatcggctttggtacattctctgttaaagagcgtgcggcacgtactggt
cgtaacccgcagaccggcgcggaaatcaagattccggcctccaaggttcctggcttcaag
gcaggcaaggctctgaaggacgccgtcaagtaa
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