Marinobacter nanhaiticus: RE428_22160
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Entry
RE428_22160 CDS
T10288
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
mnk Marinobacter nanhaiticus
Pathway
mnk00071
Fatty acid degradation
mnk00280
Valine, leucine and isoleucine degradation
mnk00310
Lysine degradation
mnk00362
Benzoate degradation
mnk00380
Tryptophan metabolism
mnk00410
beta-Alanine metabolism
mnk00640
Propanoate metabolism
mnk00650
Butanoate metabolism
mnk00907
Pinene, camphor and geraniol degradation
mnk00930
Caprolactam degradation
mnk01100
Metabolic pathways
mnk01110
Biosynthesis of secondary metabolites
mnk01120
Microbial metabolism in diverse environments
mnk01200
Carbon metabolism
mnk01212
Fatty acid metabolism
Module
mnk_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RE428_22160 (fadB)
00650 Butanoate metabolism
RE428_22160 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
RE428_22160 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RE428_22160 (fadB)
00310 Lysine degradation
RE428_22160 (fadB)
00380 Tryptophan metabolism
RE428_22160 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RE428_22160 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RE428_22160 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RE428_22160 (fadB)
00930 Caprolactam degradation
RE428_22160 (fadB)
Enzymes [BR:
mnk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RE428_22160 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RE428_22160 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RE428_22160 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
RE428_22160 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF4354
Spidroin_N
Motif
Other DBs
NCBI-ProteinID:
BES71198
LinkDB
All DBs
Position
2437324..2439471
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKEIEGGIAQLNFDLQGESVNKFNRLTIEELGAAADKLKASKDIKGLVVTS
AKDSFIVGADITEFTELFAGSEEDLVANNLKANEVFNTIEDLPFPTVTAINGMALGGGFE
MCLATDYRVMDSKAKVGLPEVKLGIFPGFGGTVRLSRLIGVDYAIEWISGGTENRADKAL
KEGAVDAVLEGSKLLDAAVDLINQCNDGKLDYMARREEKQGKIKLNAMESMMAFEISKAF
VAGKAGRNYPAPVEAIKVMQKHASLTRDKAIEVEAKGFAKMAKTNVAACLVGLFLNDQEL
KKKAKQWEKEANDVKLAAVLGAGIMGGGVAYQSALKGTPILMKDINQDGIALGLKEAKKL
LAKRVDKGKMNADQMADVLNSITPTLNYGDFKSVDLVVEAVVENPKVKDAVLRETEEMVR
EDTILTSNTSTISINTLAKNLKRPENFCGMHFFNPVHMMPLVEVIRGEKTSDKAVATTVA
YAKAMGKTPIVVNDCPGFLVNRVLFPYFGGFARLVRDGADFQKIDKVMEKFGWPMGPAYL
LDVVGMDTAKHANEVMAEGFPDRMKDENKSAIDVMFENDRYGQKNDKGFYKYETDKKGKP
KKVVDEETYKLIEPVVQGKKEFEEDEIIARMMIPLCLETVRCLEDNIVEAPADADMGLIY
GIGFPPFRGGALRYIDDIGVDKFVELADKYADLGPLYHPTEKLREMAKNGEKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaagagatcgaaggcgggatcgctcagctc
aacttcgacttgcagggcgagtcagtcaacaagttcaatcgcctgacgatcgaagagctg
ggtgccgccgccgacaagctgaaagcatccaaggatatcaagggtctggtggttaccagc
gccaaggatagctttattgtcggtgccgatatcaccgagttcaccgaactgtttgccggt
tcggaagaggacctggtggccaataacctcaaggccaatgaagtcttcaacaccatcgaa
gacctgccgttcccgaccgtgactgccatcaatggtatggctctgggtggtggtttcgag
atgtgcctggccaccgattatcgtgtcatggacagcaaggccaaggtgggtctgccggaa
gtcaagctgggtatcttcccgggctttggcggcaccgtgcgtctgtcacgtcttatcggt
gtcgactacgccatcgagtggatctccggcggcaccgagaaccgtgccgacaaagcgctc
aaagaaggcgctgtggatgcggtgctggaaggttccaagctgctggatgctgccgttgac
ctgatcaaccagtgtaacgatggcaagctggactacatggcccgccgcgaagagaagcag
ggcaagatcaagctgaatgccatggaaagcatgatggcgttcgagatctccaaggctttc
gttgccggtaaggccggcaggaactacccggcgccggttgaggccatcaaggtcatgcag
aagcatgccagcctgacccgcgacaaggcgatcgaagtggaagccaaaggcttcgccaag
atggccaagactaacgtggcagcctgcctggttggcttgttcctgaacgatcaggagctt
aagaagaaagccaagcagtgggaaaaggaagccaacgacgtgaaactggcggccgtgctg
ggcgccggtattatgggtggcggcgtggcataccagtccgcgctgaaaggcacaccgatc
ctcatgaaggacatcaaccaggacggtatcgccctgggtctcaaggaagccaagaagctt
ctggccaagcgggtcgataaggggaagatgaatgccgaccagatggctgatgtacttaac
agcattactccgaccctaaattacggtgatttcaagagcgtagacctggttgttgaagct
gttgtcgagaatccgaaggtgaaggatgctgttctgcgagagaccgaagagatggtccgc
gaagacacaatcctgacttccaacacctcgacgatctccatcaacacgctcgccaagaat
ctcaagcgtccggaaaacttctgcggtatgcacttcttcaacccggtgcacatgatgccg
ctcgttgaagttatccgcggcgagaagaccagtgacaaggctgtggcgaccaccgttgcc
tacgccaaggctatgggtaagacgcccatcgtcgttaacgactgcccgggcttcctcgtc
aaccgtgtcctgttcccgtacttcggcggcttcgcccgtctggtgcgtgatggtgccgat
ttccagaagatcgacaaggttatggaaaagttcggctggccgatgggccctgcgtacctg
ctcgacgtcgtcggcatggacaccgccaagcacgccaatgaggtgatggctgaaggcttc
ccggaccgcatgaaggacgagaacaagtccgctatcgatgtaatgttcgagaatgaccgc
tacggccagaagaacgacaagggtttctacaagtacgaaaccgacaagaagggcaagccc
aagaaggttgtcgacgaggaaacctacaagctgatcgagccggtcgttcagggcaagaag
gagttcgaggaagacgagatcatcgctcgtatgatgattcccctatgcctcgaaacggtt
cgctgcctggaagacaacattgtcgaagcacctgccgacgcagacatgggcctgatctac
ggtatcggtttcccgccgttccgtggtggtgcactgcgctatatcgatgatataggcgtc
gacaagttcgttgaacttgcagacaagtatgcagatctgggtcctttgtaccacccgacc
gagaagctgcgtgaaatggccaagaatggcgaaaagttcttcggctaa
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