Marinobacter nanhaiticus: RE428_22180
Help
Entry
RE428_22180 CDS
T10288
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mnk Marinobacter nanhaiticus
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnk03032
]
RE428_22180 (topA)
03400 DNA repair and recombination proteins [BR:
mnk03400
]
RE428_22180 (topA)
Enzymes [BR:
mnk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RE428_22180 (topA)
DNA replication proteins [BR:
mnk03032
]
Prokaryotic type
DNA Topoisomerases
RE428_22180 (topA)
DNA repair and recombination proteins [BR:
mnk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RE428_22180 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BES71200
LinkDB
All DBs
Position
2440998..2443643
Genome browser
AA seq
881 aa
AA seq
DB search
MGKNLVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPVSGSGSQTDPKERAKQAAQTRK
MNPEEKAEYKKRKARDQLVARMGVDPENDWNARYEVLPGKEKVVNELKRLAKSADHVYLA
TDLDREGEAIAWHLQETIGGEPDKYRRVVFNEITKRAIQEAFKEPGQLDRDRVNAQQARR
FLDRVVGYMVSPLLWSKLARGLSAGRVQSVAVRLIVEREREIRTFVPEEYWQVHADLSPK
GDKSPVRFEVTRDGDKAFRPTSESETKGHVDKLKASDFRVAKREDKPTRSRPSAPFITST
LQQAASNRMGFSVKKTMMLAQRLYEAGFITYMRTDSTNLSQEAVTGVRDYIENQFGSKYL
PEKPRVYGSKEGAQEAHEAIRPTDVKRRPSDISGLEKDAERLYDLIWRQFIACQMADAEF
TSTSIVVEASGYELRTRGRIIRFDGFLKAAPQSSKKDEDVALPDIKVDEVLDLAKLDPTQ
HFTKPSPRYTEASLVKELEKRGIGRPSTYASIISTIQDRGYVRLQNRRFYAEKMGDIVTD
RLSESFSNLMDYDFTARLEEELDDIAAGDIDWKRVLNGFYERFRQQLEEAGSDSDHGGMR
GNTPTETDIPCPTCSRPMQIRVASTGVFLGCSGYSLPPKERCKTTINLVSGDEVVSADDD
VEGEGESRLLRKKRRCPKCGTAMDSYLIDENRKLHVCGNNPDCSGYEVEEGTFRIKGYDG
PTLECDKCGSEMQLKTGRFGKYFGCTNTECKNTRKLLRNGEPAPPKMDPVPMPELQCEKV
DDTYVLRDGASGLFLAASKFPKNRETRAPLVKEIKPHRKEIDSKYSFLMDAPEQDPEGNP
TVIRYSRKTKEQYVMSEKDGKATGWSAFYKDGKWQVKDKNA
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaatctcgtcattgtcgagtctccggcaaaagcgaaaaccatcaacaagtac
ctgggctccgactatgtggtgaagtccagtgtcgggcatatccgcgatttgccggtcagt
ggcagtggctcccagaccgatccgaaagagcgtgcgaagcaggcggcccagactcggaag
atgaatcccgaggaaaaggccgagtacaagaagcgcaaagcgcgggaccagctcgtcgcc
cgtatgggtgtggatccggaaaatgactggaacgcacgctacgaggtgcttcccggcaag
gagaaagtggtcaacgaactgaaacgactggccaaatccgccgatcatgtctatctcgcg
acggatttggaccgcgaaggggaggcgattgcctggcacttgcaggaaaccataggcggc
gaacccgataaataccgcagggtcgtgttcaacgagatcaccaaacgtgcgattcaggaa
gccttcaaggagcctggtcagctcgatcgtgatcgggtcaacgcccaacaggcgcgtcgg
ttcctcgaccgtgtcgtgggctacatggtctctcccctgctttggagcaagttggcgcgg
ggcctgtcagcggggcgggtacaatcagtcgcggtaaggctgatcgtcgagcgcgaacgc
gagatccgcacttttgtacccgaggaatattggcaggtgcatgcggacctctcgccgaag
ggggataaatcgccggttcgcttcgaagtcacccgtgatggtgacaaagcgttccgaccg
actagcgaatctgagaccaaggggcatgtcgataagctcaaggcgtccgatttccgtgtc
gccaagcgtgaggacaagccgacccgctcgcgtcccagtgcgcctttcattacctctacg
cttcagcaggcggccagcaatcgtatgggtttcagcgtcaagaaaaccatgatgttggcc
cagcgcctctacgaggcaggttttatcacctacatgcgtaccgactccaccaatctgagt
caggaggcggtcaccggcgttcgtgactacatcgaaaatcagttcggcagcaagtacctg
ccggagaagccacgggtctacggcagcaaggagggcgctcaggaggctcatgaggccatt
cgcccgacagatgtaaaaagacgcccgtcggatattagcggcctggagaaggatgctgag
cgcctctacgacctgatctggcgtcagttcattgcctgccagatggcggacgccgaattc
acgagtacctccatcgtcgttgaggcaagcggctatgaactgcgtacccgcggccgcatt
atccgtttcgacggcttcctgaaggcggcgccccagtcatccaagaaggatgaggatgtg
gcgctgccggatatcaaggtcgacgaagtgctggacctggcgaagctcgacccgacccag
catttcaccaagccatcaccgcgttacaccgaagcaagcctggtaaaagaactcgagaag
cgaggaatcggccggccttcaacctacgcctcgattatctcgacaatccaggatcgcggt
tatgtccggctccagaatcgccgtttctacgccgagaagatgggggatatcgttaccgat
cgcctgtcagagtccttctccaacctcatggattacgacttcacggcacgtctcgaggaa
gagctggacgatattgccgccggggatatcgactggaagcgtgtacttaacggtttctac
gaacgcttccgacagcaactcgaagaagccggttcggattccgatcatggcgggatgcgg
ggcaatacgccgacggaaaccgatattccgtgcccgacctgttcccggccgatgcagatt
cgggtcgccagcaccggtgttttcctgggctgctccggctacagcctgcctcccaaggaa
cgctgcaagaccacgatcaacctggtctcaggtgacgaagtggtcagtgcggacgatgac
gttgaaggtgagggtgagagccgcttgctgcgcaagaagcgccgttgcccgaaatgcggt
acggccatggacagctacctgatcgacgaaaaccgcaagctacatgtctgcggtaataac
ccggactgctcgggctatgaggtggaagaaggcacgttccgtatcaagggttatgacggg
ccgaccttggagtgcgacaagtgcggctccgagatgcagcttaagaccggacgtttcggc
aaatattttgggtgcaccaacaccgagtgcaagaacacccgcaagctgctgcgtaacggc
gagccggcgcctcccaagatggatccagtgccgatgccagagctccaatgcgagaaggtg
gacgacacctacgtcctgcgcgatggcgcctccggtttgttccttgcggcaagcaagttt
cccaagaatcgtgagacccgtgcgccgctggttaaggagataaagcctcaccgtaaggaa
atcgattccaagtacagcttcctgatggatgcgcctgagcaggatcccgaaggtaacccg
acggtgattcgctatagccgcaagaccaaggaacagtacgtaatgagtgagaaggatggc
aaggcgacgggttggagtgccttctacaaggacggaaagtggcaagtgaaggacaagaac
gcctga
DBGET
integrated database retrieval system
