KEGG   Marinobacter nanhaiticus: RE428_22280
Entry
RE428_22280       CDS       T10288                                 
Symbol
lpdA_1
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mnk  Marinobacter nanhaiticus
Pathway
mnk00010  Glycolysis / Gluconeogenesis
mnk00020  Citrate cycle (TCA cycle)
mnk00260  Glycine, serine and threonine metabolism
mnk00280  Valine, leucine and isoleucine degradation
mnk00310  Lysine degradation
mnk00380  Tryptophan metabolism
mnk00620  Pyruvate metabolism
mnk00630  Glyoxylate and dicarboxylate metabolism
mnk00640  Propanoate metabolism
mnk00670  One carbon pool by folate
mnk00785  Lipoic acid metabolism
mnk01100  Metabolic pathways
mnk01110  Biosynthesis of secondary metabolites
mnk01120  Microbial metabolism in diverse environments
mnk01200  Carbon metabolism
mnk01210  2-Oxocarboxylic acid metabolism
mnk01240  Biosynthesis of cofactors
Module
mnk_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mnk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mnk_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
mnk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:mnk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RE428_22280 (lpdA_1)
   00020 Citrate cycle (TCA cycle)
    RE428_22280 (lpdA_1)
   00620 Pyruvate metabolism
    RE428_22280 (lpdA_1)
   00630 Glyoxylate and dicarboxylate metabolism
    RE428_22280 (lpdA_1)
   00640 Propanoate metabolism
    RE428_22280 (lpdA_1)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RE428_22280 (lpdA_1)
   00280 Valine, leucine and isoleucine degradation
    RE428_22280 (lpdA_1)
   00310 Lysine degradation
    RE428_22280 (lpdA_1)
   00380 Tryptophan metabolism
    RE428_22280 (lpdA_1)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RE428_22280 (lpdA_1)
   00670 One carbon pool by folate
    RE428_22280 (lpdA_1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mnk04147]
    RE428_22280 (lpdA_1)
Enzymes [BR:mnk01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RE428_22280 (lpdA_1)
Exosome [BR:mnk04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RE428_22280 (lpdA_1)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_binding_2 FAD_binding_3 FAD_oxidored HI0933_like AlaDh_PNT_C 3HCDH_N Thi4 NAD_binding_8 Lys_Orn_oxgnase UDPG_MGDP_dh_N Lycopene_cycl DUF3783 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: BES71210
LinkDB
Position
2454477..2455919
AA seq 480 aa
MSDKYDVIVIGAGPGGYVAAIKGAQLGLKVACVENWTSKDGKQQVLGGTCLNVGCIPSKA
LLEISHKYEEANHHFAEQGIEVKDASINIGKMMERKENIVKQLTGGIAQLFKANGVTPIH
GRGRVLANRQVEVTDNDGKTKTYEADNVIIATGSNPIEIPPAPLTEGYIVDSEGALEFDK
VPKRLGVIGAGIIGLELGSVWARLGAEVTMLEALDTFLPAVDQQCAKEALKQFKKQGLDI
KLKARVTGTSVKRNLVNVTYEDAKGEQEQKFDKLIVCVGRRPNTDNLLAADSGVNLDERG
FIFVDDNCQTDAPGVWAIGDVVRGPMLAHKASEEGIMVLERIAGHKPQVNYDAIPNVIYT
HPEVAWVGKTEEQLKAEGEAYKVGTFPFAANGRAMAANSAMGLVKIIADEKTDRILGFHV
TGPQASEIVAQGVIAMEFGSSAEDLALTCFAHPTLSESVHEAALAAGSGAIHVANKRKKK
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgtctgataagtacgacgtcatcgtcatcggtgcgggcccgggcggctacgtagcagcc
atcaagggtgctcaactgggcttgaaggttgcgtgtgttgaaaactggacctccaaggac
ggtaagcagcaggtgcttggcggtacctgtctgaatgtgggttgtattccgtccaaggcc
cttctggaaatttcccacaaatacgaagaagccaaccatcactttgccgagcagggcatc
gaggtgaaagacgcctccatcaacatcggcaagatgatggagcgtaaggaaaacattgtt
aagcagttgaccggcgggatcgcccagctgttcaaggccaacggcgtcaccccgatccac
ggacgtggccgcgtgctcgccaatcgtcaggtagaggtcaccgataatgacggcaagacc
aagacctacgaagccgacaatgtgattatcgccaccggctccaacccgatcgagattccg
ccagcgcctctgactgaaggctacatcgtcgattcggagggtgccctcgagttcgacaag
gtgcccaagcgcctgggcgtaatcggcgccggcatcatcggtcttgagctcggtagtgtc
tgggcacgtctgggtgcggaagtgaccatgctggaagcgctcgacaccttcctgccagcg
gttgaccagcagtgtgccaaggaagcactcaagcaattcaagaaacagggtctggacatc
aagctgaaggcgcgtgtaaccggtacctccgtcaagcgtaacctggtgaacgtgacctac
gaagacgccaagggcgagcaggagcagaagttcgacaagcttattgtttgtgtcggccgt
cgtccgaacactgacaacctcctggctgcggacagtggcgttaacctggatgagcgcggt
ttcatcttcgtcgatgacaattgccagaccgacgcgccgggcgtatgggcgatcggtgac
gtggtacgtggcccgatgcttgcccacaaggcgtccgaggaaggcatcatggtcttggag
cgtatcgccggtcacaagccgcaggtgaactacgacgcgatcccgaacgtgatctatacc
cacccggaagtcgcctgggttggcaagaccgaagagcagctcaaggctgaaggcgaagcc
tataaggtaggtactttcccgtttgcggccaacggccgtgcaatggcagccaattcagcc
atgggtctggtcaagatcattgctgatgaaaagaccgaccgtattctcggtttccatgtc
accggaccccaagcgtctgaaattgtcgcccagggcgtgattgccatggaattcggttcc
agtgccgaagatctggcgctgacctgcttcgcacatccgaccctttccgagtcggtccac
gaagcagctcttgcagcaggcagcggcgcgatccacgtcgccaacaagcgcaagaaaaaa
taa

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