Marinobacter nanhaiticus: RE428_22500
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Entry
RE428_22500 CDS
T10288
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
mnk Marinobacter nanhaiticus
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mnk03009
]
RE428_22500 (dbpA)
Enzymes [BR:
mnk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
RE428_22500 (dbpA)
Ribosome biogenesis [BR:
mnk03009
]
Prokaryotic type
rRNA helicases
RE428_22500 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
AAA_22
CMS1
Helicase_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
BES71232
LinkDB
All DBs
Position
2478923..2480299
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AA seq
458 aa
AA seq
DB search
MSDFAQLPLRPDLLGNLSSLGYEAMTPIQAASLPLILKGQDVIAQARTGSGKTAAFGLGL
LQKLEVERFRVQSLVLCPTRELADQVARELRKLARAIHNIKILSLCGGQPIGPQIGSLEH
GAHIIVGTPGRVVDHLRKGTLQVDDVSLLVLDEADRMLDMGFQDELDAIVAQLPVSRQTL
LFSATYPEQIAAIAEHVMNAPERIEVEAGHAHQSIQQFFYPVKSDEERIDGLRLLLMKHR
PDSAIVFCNTKRETETVADALRSMGFTALALHGDLEQKARDLVLVRFANKSATVLVATDV
AARGLDIDDMDAVFNFHVARDLDVHVHRVGRTGRAGNTGLAFTFFSEKEKHKIEALAEKT
GKPIKEANLPAGNQRNQTTYKPPMVTLQIDGGKKQKVRPGDILGALTGKDGIPGKAVGKI
SVMDNSAFVAVTRDHAKQALEKLSSGKMKGRSFRARRI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatttcgctcagctacccctacgtcccgacttgctgggcaacctgtcatccctc
ggttatgaggcgatgacgcccatccaggcggcaagtctaccgctgatactgaaagggcag
gatgtgatcgctcaggcccgcacggggtcgggaaagacagccgcgtttggtttgggactg
ctgcagaaactggaggttgaacgctttcgggtgcagtcgctggtgctttgtcccacccga
gagctggcagaccaggtggcccgggagctgcgtaagctggcgcgggcgatccataacatc
aagattctatccttgtgcggcggccagccgatcgggccgcaaatcgggtccctcgaacat
ggcgcccatatcatcgtcggtacgccgggccgggtggtggatcacctgcgcaaagggacg
ctccaagtggacgacgtttccttgctggtgctcgatgaagcggatcgtatgctggatatg
ggcttccaggacgagctggatgctatcgtcgcgcaactgcccgtgtcccgccagacgctg
ctgttcagcgccacctatcccgagcagattgcagccatcgccgaacacgtcatgaacgcg
cctgagcgtatcgaggtcgaagccggccacgcccatcagtcgatccagcagtttttctac
ccggttaagagcgacgaagagcgcatcgatggattgcgcctgttgttgatgaagcatagg
cctgactcggccattgtgttctgcaataccaagcgagagacagaaacggtggccgacgcc
ttgcgcagtatgggcttcaccgctttggcattgcacggggacctcgaacagaaagcgcgg
gatctggtactcgtgcgctttgccaacaagagcgctacggtactggttgcaacggacgtg
gccgcacgcggtctggatatagacgacatggatgccgtattcaacttccatgtggcccgt
gacctggacgtccacgtccacagggtcggccgtaccggtcgtgccggaaacacaggactg
gccttcacctttttctccgagaaggaaaaacacaagatagaggcgttggccgaaaagacc
gggaagcccatcaaggaagcgaatctgcccgcgggaaaccaacgcaaccagactacctac
aagccgccgatggtgaccttgcagatcgatggtggtaaaaaacagaaggtaaggcccggc
gatattttgggtgcgcttactggcaaagacggtattccgggaaaggctgtcggaaaaatc
agcgtaatggataacagtgcgtttgttgccgtcacccgggatcatgcaaaacaggcgctt
gaaaagctttcttcaggcaagatgaaaggacgttcgttccgggccagacgcatctag
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