KEGG   Marinobacter nanhaiticus: RE428_23480
Entry
RE428_23480       CDS       T10288                                 
Symbol
lpdA_2
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mnk  Marinobacter nanhaiticus
Pathway
mnk00010  Glycolysis / Gluconeogenesis
mnk00020  Citrate cycle (TCA cycle)
mnk00260  Glycine, serine and threonine metabolism
mnk00280  Valine, leucine and isoleucine degradation
mnk00310  Lysine degradation
mnk00380  Tryptophan metabolism
mnk00620  Pyruvate metabolism
mnk00630  Glyoxylate and dicarboxylate metabolism
mnk00640  Propanoate metabolism
mnk00670  One carbon pool by folate
mnk00785  Lipoic acid metabolism
mnk01100  Metabolic pathways
mnk01110  Biosynthesis of secondary metabolites
mnk01120  Microbial metabolism in diverse environments
mnk01200  Carbon metabolism
mnk01210  2-Oxocarboxylic acid metabolism
mnk01240  Biosynthesis of cofactors
Module
mnk_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mnk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mnk_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
mnk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:mnk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RE428_23480 (lpdA_2)
   00020 Citrate cycle (TCA cycle)
    RE428_23480 (lpdA_2)
   00620 Pyruvate metabolism
    RE428_23480 (lpdA_2)
   00630 Glyoxylate and dicarboxylate metabolism
    RE428_23480 (lpdA_2)
   00640 Propanoate metabolism
    RE428_23480 (lpdA_2)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RE428_23480 (lpdA_2)
   00280 Valine, leucine and isoleucine degradation
    RE428_23480 (lpdA_2)
   00310 Lysine degradation
    RE428_23480 (lpdA_2)
   00380 Tryptophan metabolism
    RE428_23480 (lpdA_2)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RE428_23480 (lpdA_2)
   00670 One carbon pool by folate
    RE428_23480 (lpdA_2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mnk04147]
    RE428_23480 (lpdA_2)
Enzymes [BR:mnk01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RE428_23480 (lpdA_2)
Exosome [BR:mnk04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RE428_23480 (lpdA_2)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox HI0933_like FAD_oxidored Pyr_redox_3 NAD_binding_8 AlaDh_PNT_C FAD_binding_3 Lys_Orn_oxgnase GIDA FAD_binding_2 Lycopene_cycl Thi4 3HCDH_N PilZ
Other DBs
NCBI-ProteinID: BES71330
LinkDB
Position
2590714..2592114
AA seq 466 aa
MKNYDVLVIGGGPGGYNAAIRAGQLGLKVGCIEGRETLGGTCLNVGCMPSKALLHASEYF
EAAVGKEFATLGIEVKPKLNLEQMMKQKTESVDALTKGIEFLFRKNKVDWIKGWGRLAGE
GKVDITAADGTNETFSAKDIVIATGSEPTPLPGVPFDGNRILDSTGALSISEVPKRLVVI
GAGVIGLELGSVWRRLGSEVTVVEYLDRICPGMDTETAKTFQRSLSKQGIKFKLATKVTE
ARSDGDSVQLRLEPAAGGEKQTLEADYVLVAIGRRPYTEGLGLETVGLQTDNRGMLSNTK
HRSPVDGIWVIGDVTSGPMLAHKAEDEAVACIELIAGKSGEVNYNAIPSVIYTRPEVATV
GKTEEQLQSEEREYKVGKFPFSANSRAKINHEGEGFVKVLADARSETILGVHMIGPNVGD
MIAEYAVAIEFAATAEDIALTSHPHPTRSEALRQAAMDVDGWAMQA
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgaaaaactacgacgtactggtgatcggcggcggtcctggcggatataacgcggccata
cgggccgggcaacttggcttgaaagtgggctgcatcgaaggtcgggagaccctcggcggt
acctgtctcaacgtcggttgcatgccctccaaggcattgctgcatgcctccgagtacttt
gaagcggcagtgggtaaggagttcgcaacgcttggcatcgaggttaaaccaaaactgaac
ctcgaacagatgatgaagcaaaaaaccgaaagcgtggacgccctcaccaaaggcatcgag
ttcctgttccgcaagaataaggtggattggataaagggttgggggagactggcgggagag
gggaaggtcgacatcaccgcggcagacggcaccaacgagaccttctccgcgaaagacatc
gttatcgcgacaggctccgaacccacaccgttgcctggggtgccttttgacggaaaccgt
atcctggattccaccggcgccttgtcgatatcggaggttcccaaacggctggttgtcatt
ggcgccggcgtaatcggtctggaactgggctcggtctggcgccgcctgggcagtgaggtc
acggtagtagaatatctcgaccgcatctgccccggtatggataccgaaaccgccaaaacc
ttccagcgcagcctgagcaagcagggtatcaagttcaagctggccaccaaggtgaccgag
gcacgaagcgacggcgacagcgtccaactgcgactcgagcccgcagccgggggcgagaaa
cagacgctcgaagccgactacgtgctggtggcgatcggccgccgaccctacaccgagggc
cttggtcttgaaacggtgggtctgcaaaccgataaccgcggcatgctgagcaacacaaag
caccgcagtccggtagacggaatctgggttattggcgatgtcacgtcgggcccgatgctc
gcccacaaggcggaagacgaggcggtagcatgtatcgagctgattgcggggaaatctggc
gaagtcaattacaacgccattcccagcgtaatctacacccgcccggaagtggccaccgtg
ggcaagaccgaggaacagctccaatccgaggaaagggagtacaaggtgggcaagttcccg
ttctctgccaacagccgggcaaagatcaaccatgaaggcgaaggattcgtgaaagtgctc
gcggatgcccgaagcgagaccatcctgggtgtacacatgattggaccgaatgtaggcgac
atgattgccgaatatgcggtagcaatcgagtttgcggcgactgcagaagatattgcgctc
accagccatccgcatccgacacgctcggaagccctgaggcaagccgccatggacgtggat
gggtgggcgatgcaggcttag

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