Marinobacter nanhaiticus: RE428_24120
Help
Entry
RE428_24120 CDS
T10288
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mnk Marinobacter nanhaiticus
Pathway
mnk00260
Glycine, serine and threonine metabolism
mnk00460
Cyanoamino acid metabolism
mnk00630
Glyoxylate and dicarboxylate metabolism
mnk00670
One carbon pool by folate
mnk00680
Methane metabolism
mnk01100
Metabolic pathways
mnk01110
Biosynthesis of secondary metabolites
mnk01120
Microbial metabolism in diverse environments
mnk01200
Carbon metabolism
mnk01230
Biosynthesis of amino acids
mnk01240
Biosynthesis of cofactors
mnk04981
Folate transport and metabolism
Module
mnk_M00140
C1-unit interconversion, prokaryotes
mnk_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RE428_24120
09102 Energy metabolism
00680 Methane metabolism
RE428_24120
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RE428_24120
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RE428_24120
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RE428_24120
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RE428_24120
Enzymes [BR:
mnk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RE428_24120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
BES71394
LinkDB
All DBs
Position
complement(2671121..2672383)
Genome browser
AA seq
420 aa
AA seq
DB search
MFDTTETLASYDDALWAAMQDEAARQEDHLELIASENYASPLVMQAQGSCLTNKYAEGYP
AKRYYGGCEHVDRVEQLAIDRAKALFGADYANVQPHSGSQANAAVYMALLNAGDTVLGMS
LAHGGHLTHGAHVSFSGKLYNAIQYGLDESTGEIDYAQVEALAREHRPKMIVAGFSAYSR
VVDWAKFREIADQVGAYLMVDMAHVAGLVAAGVYPDPLPHAHVVTTTTHKTLRGPRGGLI
LSRGQPELDKKLNAAVFPAGQGGPLMHVIAAKAVAFKEAAEPQFHAYQQQVVTNARAMAD
VFIARGYDVVSGGTDNHLFLLSLVKQGLTGKAADAALGEAHITVNKNAVPNDPESPFVTS
GLRIGSPVVTTRGLGESECQVLAGWIADVLDALQAGDPSATIAGVREKVSQLCRDFPAYG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatacgacagaaaccctggcttcatacgacgacgcactctgggcggcaatgcag
gacgaagcggcccgccaggaagatcatcttgaactcattgcctctgaaaactatgcgagt
ccactggttatgcaggcgcaaggctcctgcctgaccaacaagtatgcggagggttatccg
gccaagcgttactacggcggatgtgagcacgtcgaccgggtcgagcaactagccatcgac
cgggctaaagcgctgttcggtgccgactacgccaatgtccagccgcactccgggtcacag
gccaacgcggctgtctacatggcgctcctgaacgcgggcgacacagtgctaggtatgagc
ctggcgcatggaggtcacctgacgcacggtgcccatgtgagcttttccggcaagctatat
aacgccatccagtatggactcgacgaatccaccggcgaaatcgactacgcacaggtcgaa
gccctggctcgggagcataggccgaagatgattgttgcgggtttttcggcgtattcccgc
gttgtcgactgggcaaaattccgggagattgccgaccaggtcggcgcctacctgatggtc
gacatggcccacgttgcaggtctggtcgctgcaggtgtctaccccgacccgctaccgcat
gcccacgtggtcaccacgaccacgcacaagacgcttcggggcccgaggggtggtcttatc
ctctcccggggccagcctgaactcgacaagaaactgaacgccgcggtcttccccgcgggt
cagggcggtccgctgatgcatgtcattgcagccaaggcggtggccttcaaggaagctgcc
gagccgcaatttcacgcctaccagcaacaggtggtgacgaatgcccgcgcaatggctgac
gtttttatcgcccggggttatgacgtggtgtctggcggcaccgacaatcacctgttcctg
ttgagtcttgtgaagcaggggcttactggcaaggccgccgatgctgccctcggcgaggct
cacataaccgttaacaagaatgcagtgcccaacgatccggagtcgccctttgtcacgtcc
ggcttacgtatcggttctccggttgtaaccactcgcggtttgggtgaatctgaatgtcag
gtgctggccggttggatcgccgacgtattggatgccctacaggctggagaccccagtgcg
accattgcaggggtccgcgagaaggtgagccagctttgccgggatttccccgcctacggt
tga
DBGET
integrated database retrieval system