Marinobacter nanhaiticus: RE428_24200
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Entry
RE428_24200 CDS
T10288
Symbol
dgcB
Name
(GenBank) dimethylglycine demethylation protein DgcB
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
mnk Marinobacter nanhaiticus
Pathway
mnk00260
Glycine, serine and threonine metabolism
mnk01100
Metabolic pathways
Module
mnk_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RE428_24200 (dgcB)
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Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_8
Fer4_10
Fer4_9
Fer4_7
Fer4_17
Fer4
Fer4_2
Fer4_16
Fer4_6
Fer4_21
Fer4_4
Fer4_22
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
BES71402
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All DBs
Position
2682433..2684373
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AA seq
646 aa
AA seq
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MLPDWLLPALITIALGLFAIGAIRRIRLWRAGRPEPVNLIAGLLAMPRRYLVDLHHVVAR
DKPMSNTHVATAGGFVLSMLLIIPVYVFGLESRWITIPLLASTLTMFVGALFVYRRRRHP
PARLSKGPWMRLPKNLLAFSGSFFLLTLLASDVLPENLEHGVIVSVLLVGVILGLSELLF
GMGWGGPMKHAFAGALHLAFHRRPERFGGGRSTGLKPVDLDGPLGVAKPADFKWNQLLGF
DACVQCGRCEAVCPAFAAGQPLNPKKLIQDMVVGLTAGSDANYAGSPYPGIDVGNAQGSP
HQPIVDGLVNADTLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLERGKTPNKGAEVLD
NLIATDNPGGYEPGSRMNWAADLALPLMADRQEAEVLFWVSDGCFDMRSQRILRAFVKIL
KAADVDFAVLGNEECDSGDVARRLGDDATFQMLAKHNIATLGRYRFRRIVTTDPHAFHVL
KNEYGDFGGHYDVAHHSTFINELVAQGRIKLDRIKRGTVTYHDPCYLGRYNGEYEAPRAL
LAALGITVSEMERSGYRSRCCGGGGGAPITDVPGEHRIADMRVNDAREVEADTIAVACQQ
CTAMLEGVVEPRPAIHDVAELVAEALVDEVLEPSARVVRAEVEEVC
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgctccctgattggctgcttccagcgctgataacgatcgcccttggtctttttgccatt
ggtgccatccgtcgtattcgcctctggcgcgcgggtcgtcccgaaccagtcaacctgata
gcgggactactggccatgccgcggcggtacctggtggatctgcaccacgtggtagcgcgt
gacaaaccgatgtccaatacacacgtcgcgacggcaggcggcttcgtgttgtccatgctg
ctcatcattccggtctatgtattcggactcgaaagtcggtggatcacgattccgcttctg
gcatcgacactcaccatgttcgttggagccctgtttgtataccgtcgccgtcgtcatccg
ccggcgcgactgtcaaagggcccgtggatgcgtttgccgaaaaatctcctcgcgttttcc
ggctcgttctttctacttacgctattggcgtccgacgtcctccccgaaaacctggaacac
ggggttatcgtcagtgtattgctggtgggggtcatcctcggcttgtcagagctgcttttc
ggcatggggtggggcgggccgatgaagcacgccttcgccggtgctttgcaccttgctttc
catcggcgcccggagcgctttggcggcgggcgatcgaccggcctgaaacccgtcgatctc
gatggcccgttgggggtggccaaaccggcggacttcaaatggaaccaactgctcggcttc
gatgcctgtgtccaatgcggtcgctgtgaagccgtatgcccggcctttgcggcgggccag
cccctgaacccgaagaagctgatccaggacatggtcgttggcctgaccgccggaagcgac
gccaactatgccggtagcccctacccaggtatcgacgtcggtaacgcgcagggcagtccc
caccagcctatcgtggacggacttgtcaacgccgataccctatggtcctgcacgacctgt
cgggcctgtgtcgaagaatgtccaatgatgatcgaacacgtcgacgcgatcgtcgatatg
cgtcgccacctgacgcttgagcgcgggaaaacgccgaataaaggcgctgaggtactggac
aacctgatcgccaccgacaatcccgggggctatgagcctggcagtcgcatgaactgggcc
gcagatctggcgttgcccttaatggccgacaggcaggaggctgaggtgctgttctgggtc
agcgacggctgtttcgatatgcgtagccaacgcattctaagggcgttcgtcaagatcctc
aaagccgccgacgtcgatttcgcggttcttggcaacgaggaatgcgattccggcgatgtt
gcccgacgcctcggcgacgacgcgaccttccagatgcttgccaaacacaatatcgccacg
ctgggcagataccggttccgccggatcgtgaccaccgatccccatgccttccacgttctc
aagaacgagtacggcgatttcggcggtcactacgatgtcgcgcaccacagcacgtttatc
aatgaactcgtcgcgcaggggcgtatcaagctggaccggatcaagcgcgggaccgttacc
tatcatgatccttgctatctcggtcgctataacggcgagtacgaggctcctcgcgcattg
cttgcagccctgggaatcacagtcagcgaaatggaacgctcgggttatcgctcccgttgc
tgtggcgggggaggtggagcacccataacggatgttcctggagaacaccgcatcgcggat
atgcgagtgaacgatgcccgggaggtagaggcggataccattgccgtcgcctgccaacag
tgcaccgccatgctcgaaggtgtggttgaaccgcgaccggctattcacgatgtcgccgaa
ctggttgcggaagccctggtagacgaggtgctcgaacccagcgcccgggtagtccgcgcc
gaggtagaggaggtgtgctga
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