Marinobacter nanhaiticus: RE428_25270
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Entry
RE428_25270 CDS
T10288
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mnk Marinobacter nanhaiticus
Pathway
mnk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RE428_25270 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnk03400
]
RE428_25270 (recD)
Enzymes [BR:
mnk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RE428_25270 (recD)
DNA repair and recombination proteins [BR:
mnk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RE428_25270 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
AAA_22
Viral_helicase1
SH3_13
Helicase_RecD
UvrD-helicase
SLFN-g3_helicase
AAA_28
PhoH
AAA_16
DEAD
nSTAND3
NTPase_1
AAA_18
TraI_hel_assoc_N
AAA_5
T2SSE
AAA_29
TrwB_AAD_bind
AAA_24
ResIII
Motif
Other DBs
NCBI-ProteinID:
BES71509
LinkDB
All DBs
Position
complement(2790568..2792316)
Genome browser
AA seq
582 aa
AA seq
DB search
MRDGLRLYLRRYWRYEQTIASRIEQRLARQSAIQDADSGDTRHLAEALERLFGPARPDAA
TDWQRVACANAARQGFSVITGGPGTGKTTTVVRLLAALQHVAMNRTNDSRQLIIRLAAPT
GKAAARLNESIAGAIDNLDLKAFGDGEALRQAILTEVTTLHRLMGSIPGSRQFRHNRNNP
LLLDVLVVDEASMVDVEMMAQVLDALPENAQLILLGDKDQLASVDAGAVLGDLCQRAHQG
RYHASTIAWLEKISGCPIDRQFMDDQGSTLDQSITLLRHSYRFDAQSGIGQLAQAVNQAG
TEDQIVAPQAVSGLFEEGYSDIARVLLPPRSAEATISAHCIDGGARYFQNEGRERQTGGK
TIAPPEGYAHYLDVMKASAPGVGASQEALDQWAGGVLKAHNQFQVLCALRRGPFGVEGLN
QLIAQALRDRRLIPATEGWYAGRPVLVTRNDYSVGLMNGDIGITLSLPVEAENGQGVRQI
LRVAFPANDGSGRIKWVLPSRLHAVETVYAMTVHKSQGSEFIHTCLVLPDRTNPVLTREL
VYTGITRARHWFSLLLPDESVFREAIGRGVTRTSGLRAALEK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgacggtttacggctctacctgcggcgttactggcggtatgagcaaaccatcgca
agccgtatagagcagcgtctggcgcggcaatctgcgatccaggatgccgactcaggtgat
accagacatctggccgaagccctggaacggctgtttggaccagcacgtccggacgctgcc
accgattggcagcgcgtcgcttgcgccaacgccgcgcggcagggtttcagcgttatcact
ggtggccccggtacgggcaagaccaccaccgttgtacgtctgctggcggctttgcagcat
gtagccatgaaccgaacaaacgactcgcgccagctcatcatccggttggctgcgccgacg
gggaaagccgccgcccggctgaacgaatccatcgccggggccatcgacaacctcgatctc
aaggccttcggtgacggcgaagccctgcgccaggccatactgaccgaagtcactacgctg
catcgactgatggggagcatcccgggttcccgccagttccggcacaaccgcaacaacccg
ctgctgctggatgtgctcgtcgtagacgaagcctccatggtggatgtggagatgatggcc
caggtgctcgacgccttgccggaaaacgcccaacttatcctgctgggcgataaggatcag
cttgcctccgtggacgcgggggctgtgcttggcgacctgtgccagcgagctcaccagggc
cgttatcacgcgtcgacgattgcgtggctggagaagatatccggttgcccgatcgatcgg
cagttcatggacgaccagggctccacgctagaccagagcatcacgctactgcgccacagc
tatcgtttcgatgcgcagagtggcatcgggcaactggcgcaggccgtcaaccaggccggg
acggaggaccagatcgttgcacctcaggctgtatccggactgtttgaagaaggctattcg
gacattgcgcgcgtgctgcttccgccacggtcggctgaagccacgatcagtgcgcattgt
atcgacgggggcgcccgatatttccaaaatgaagggcgggaacgccaaactggcggtaaa
actatagctccgccagaaggttatgcgcattatctcgacgtgatgaaagcttccgcgcct
ggcgtcggtgcgagccaggaagcgctggaccagtgggctggcggcgtactgaaggcgcat
aaccagttccaggttttgtgcgcactgcgccgggggccgttcggggtcgaaggattaaac
cagctaatcgcccaggcgctgcgcgaccgacgcctgatccccgcaaccgaaggctggtat
gccggccgtcctgtgctggtgacgcggaacgactacagcgtcgggcttatgaacggggat
atcgggattacgttatcgctcccggtcgaggcggagaacgggcagggcgtacgccagatc
ctgcgggtggcctttcccgccaacgatggcagcggacgcatcaagtgggtcctgccgagc
cgcctccacgccgtggaaaccgtgtacgccatgacggtgcataaatcccagggatcggaa
tttatccatacctgcctcgtgctgccggacagaacgaatcccgtcctgactcgtgagtta
gtgtacacgggaatcactcgggctcggcattggttcagtttgctgttgccggatgaatcg
gtgtttcgggaggcgatcgggcgcggggtgacgcggacatctgggttgagagcagccctg
gagaaatag
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